| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3026726 = | 74 (1.520) | 17 (0.370) | 9/140 | 3.4 | 19.2% | coding (77/1377 nt) | ECB_02826 | hypothetical protein |
| ? | REL606 | 3027253 = | 74 (1.630) | coding (418/660 nt) | ECB_02827 | Polysialic acid transport ATP‑binding KpsT | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TAATTGTTTTTGAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3026805‑3026726‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatatAATAATCAAACTTAAATGCCATGCTTAAACCAAAGCCTAAACGCGATCGCATACCAGATGAGTAAGTTTTAATC > REL606/3027253‑3027326 TAATTGTTTTTGAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAG < 1:922355/76‑1TAATTGTTTTTGAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAG > 2:138649/1‑76 gATTGTTTTTGAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGA > 2:774898/2‑76 AATTGTTTTTGAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGA > 2:918783/1‑76 AATTGTTTTTGAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGA > 2:1455093/1‑76 TGTTTTTGAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATAT < 1:1053087/76‑1 TGTTTTTGAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATAT < 2:1004834/76‑1 TTGAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAA < 2:1516757/76‑1 TGAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAAT < 2:1063599/76‑1 TGAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAAT < 2:1063611/76‑1 GAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATC < 2:1174804/76‑1 AAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCA < 2:1125459/76‑1 AGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCAAAC < 2:1376253/76‑1 AGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCAAAC < 2:1543589/76‑1 AGGAGTTGGAGCTTGTCAAAGGTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCAAAC < 2:1543608/76‑1 GGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCAAACT < 2:1353619/76‑1 GGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCAAACT < 2:1353620/76‑1 GTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCAAACTTAA < 2:981055/76‑1 GTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCAAACTTAA < 2:981042/76‑1 GTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCAAACTTAA < 2:363053/76‑1 GTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCAAACTTAA < 2:363046/76‑1 GTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCAAACTTAA < 2:363029/76‑1 GCTTGTCAAAGTTAAGAAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCAAACTTAAATGCCA < 2:424885/76‑1 TGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATATAATAATCAAACTTAAATGCCTTGC < 2:1014495/76‑1 TATAATAATCAAACTTAAATGCCATGCTTAAACCAAAGCCTAAACGCGATCGCATACCAGATGAGTAAGTTTTAAT < 1:1247516/76‑1 ATAATAATCAAACTTAAATGCCATGCTTAAACCAAAGCCTAAACGCGATCGCATACCAGATGAGTAAGTTTTAATC < 2:1162431/76‑1 ATAATAATCAAACTTAAATGCCATGCTTAAACCAAAGCCTAAACGCGATCGCATACCAGATGAGTAAGTTTTAATC > 1:314861/1‑76 TAATTGTTTTTGAAAAGGAGTTGGAGCTTGTCAAAGTTAAGCAAGTTAGTAACAAAGCCTGATATGTTCTTCAGAGATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3026805‑3026726‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatatAATAATCAAACTTAAATGCCATGCTTAAACCAAAGCCTAAACGCGATCGCATACCAGATGAGTAAGTTTTAATC > REL606/3027253‑3027326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |