| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3026726 = | 74 (1.520) | 17 (0.370) | 9/140 | 3.4 | 19.2% | coding (77/1377 nt) | ECB_02826 | hypothetical protein |
| ? | REL606 | 3027253 = | 74 (1.630) | coding (418/660 nt) | ECB_02827 | Polysialic acid transport ATP‑binding KpsT | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GACTTTTTCTGATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCTTTTCAAAAACA > REL606/3026653‑3026801 | gACTTTTTCTGATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCata < 2:477923/76‑1 (MQ=255) tttCTGATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATctct < 1:605136/76‑1 (MQ=255) tttCTGATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATctct < 1:605118/76‑1 (MQ=255) tttCTGATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATctct > 1:1573531/1‑76 (MQ=255) tttCTGATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATctct < 2:1403334/76‑1 (MQ=255) ctttGATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTCATCATATCTCTg > 2:843329/4‑76 (MQ=255) cTGATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTgaa < 1:1521916/76‑1 (MQ=255) cTGATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTgaa < 1:1521935/76‑1 (MQ=255) gATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTgaaga > 1:1266692/1‑76 (MQ=255) gATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTgaaga < 2:1414386/76‑1 (MQ=255) gATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTgaaga > 1:810941/1‑76 (MQ=255) aTTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTgaagaa < 1:314504/76‑1 (MQ=255) tttATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAAc > 1:478256/1‑76 (MQ=255) tttATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAAc > 1:985012/1‑76 (MQ=255) tATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACat < 2:1562248/76‑1 (MQ=255) aTCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACata > 1:213536/1‑76 (MQ=255) tCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACatat < 1:1466931/76‑1 (MQ=255) taGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATc > 2:1181796/2‑76 (MQ=255) taGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATc > 2:1181806/2‑76 (MQ=255) aGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCa < 1:1243145/76‑1 (MQ=255) aGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCa < 1:1243141/76‑1 (MQ=255) gttgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTTTTAATCATATCTCTGAAGAACATATCAgg > 1:709324/1‑76 (MQ=255) gttgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAgg < 1:606775/76‑1 (MQ=255) gttgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAgg < 1:606773/76‑1 (MQ=255) gttgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAgg > 1:709333/1‑76 (MQ=255) gttgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAgg > 1:73955/1‑76 (MQ=255) gttgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAgg < 1:859194/76‑1 (MQ=255) gttgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAgg < 1:1295477/76‑1 (MQ=255) gttgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAgg < 1:1295476/76‑1 (MQ=255) ttttttttATTATTTTAGTCTTTTATTGTATCCCCACTTCTTTTCTTAATCATATCTCTTAATAACATATCAGGCt < 1:444822/74‑1 (MQ=255) tgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCt > 1:419774/1‑76 (MQ=255) tgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCt > 1:419786/1‑76 (MQ=255) tgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCt > 1:615011/1‑76 (MQ=255) tgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCt > 1:615004/1‑76 (MQ=255) tgttTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCt > 1:614990/1‑76 (MQ=255) tttttATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTg > 1:382229/1‑76 (MQ=255) tttATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGtt < 1:768790/76‑1 (MQ=255) tttATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGtt > 1:840668/1‑76 (MQ=255) tttATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGtt < 1:1066480/76‑1 (MQ=255) tttATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGtt < 1:166264/76‑1 (MQ=255) tttATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGtt < 1:166274/76‑1 (MQ=255) tttATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGtt < 1:1066483/76‑1 (MQ=255) tattatTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTAc < 1:301992/76‑1 (MQ=255) ttattTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTa > 1:681699/1‑76 (MQ=255) ttattTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTa > 2:597634/1‑76 (MQ=255) attTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGttacttac < 1:1171851/76‑1 (MQ=255) attTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAAc < 1:1171866/76‑1 (MQ=255) ttGAGTCTTGTATTGTATCCCCACGTCTTTTCTTAAGCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACtt < 1:1449438/76‑1 (MQ=255) tGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTg > 2:39041/1‑76 (MQ=255) gAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGc > 2:938351/1‑76 (MQ=255) gAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCAGAAGAACATATCAGGCTTTGTTACTAACTTGc < 1:1552097/76‑1 (MQ=255) tCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTa < 1:1415912/76‑1 (MQ=255) cTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTaa < 1:797717/76‑1 (MQ=255) tATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTATTACTAACTTGCTTAACTTTGACaa < 2:790569/76‑1 (MQ=255) aTCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAg < 1:603594/76‑1 (MQ=255) aTCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAg < 1:603580/76‑1 (MQ=255) ccccccGTCTTTTTTTTATCATATCTCTGAAGAAAATATCCGGCTTTGTTTCTAACTTTCTTTACTTTGACAAGCt > 2:979152/1‑76 (MQ=255) ccACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTcc > 2:174762/1‑76 (MQ=255) cACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCa > 2:1101990/1‑76 (MQ=255) aCGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCaa > 1:804801/1‑76 (MQ=255) gTCTTTTCTGAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACt < 1:1518289/76‑1 (MQ=255) tCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTc > 1:1465751/1‑76 (MQ=255) cTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTcc < 1:728464/76‑1 (MQ=255) ttCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCttt > 1:59448/1‑76 (MQ=255) ttCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCttt > 1:497501/1‑76 (MQ=255) tCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCtttt < 2:1317250/76‑1 (MQ=255) cTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCTTTTc < 2:1078315/76‑1 (MQ=255) ttAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCTTTTCa > 2:87777/1‑76 (MQ=255) tAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCCACTCCTTTTCaa > 1:621857/1‑76 (MQ=255) aaTCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCTTTTCaaa > 1:93463/1‑76 (MQ=255) aaTCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCTTTTCaaa > 1:93478/1‑76 (MQ=255) aaTCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCTTTTCaaa > 1:319249/1‑76 (MQ=255) aaTCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCTTTTCaaa > 1:319266/1‑76 (MQ=255) aTCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCTTTTCaaaa > 2:643464/1‑76 (MQ=255) atatCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCTTTTCAAAAACa > 1:1053087/1‑76 (MQ=255) atatCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCTTTTCAAAAACa > 2:1004834/1‑76 (MQ=255) | GACTTTTTCTGATTTATCAGGTTGTTTTTTATTATTTGAGTCTTTTATTGTATCCCCACGTCTTTTCTTAATCATATCTCTGAAGAACATATCAGGCTTTGTTACTAACTTGCTTAACTTTGACAAGCTCCAACTCCTTTTCAAAAACA > REL606/3026653‑3026801 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |