| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2039188 = | 35 (0.590) | 11 (0.200) | 9/140 | 4.8 | 14.1% | coding (507/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | 2039561 = | 102 (1.840) | coding (134/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2039267‑2039188‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctattTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGG > REL606/2039561‑2039634 CGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAAC > 1:1514238/1‑76CGCTTTATGATCATCCAGATAAATATAGTGAATATCGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAAC > 1:528957/1‑76 GCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACT > 1:1147154/1‑76 GCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACT < 1:1344402/76‑1 CTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTA > 1:360574/1‑76 TTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTAT < 1:1731243/76‑1 TTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATT > 1:1479991/1‑76 TTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATT < 2:354923/76‑1 ATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATTTG < 2:361676/76‑1 GATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATTTGGT < 2:1539621/76‑1 ATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATTTGGTC < 2:1421174/76‑1 CCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATTTGGTCTTTAT < 2:281140/76‑1 CAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAA‑‑GTAAATGCTATTTGGTCTTTATATT < 2:646266/76‑1 AGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATTTGGTCTTTATAT < 2:200952/76‑1 TATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTGTTTGGTCTTTATATTTAGATT < 2:1296159/76‑1 TATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATTTGGTCTTTATATTTAGATT < 2:1296148/76‑1 TTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATTTGGTCTTTATATTTAGATTCTTTTATTGTA < 2:1613231/76‑1 TGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATT‑‑GTATTTATATTTAGATTCTTTTATTGTATTT < 2:1321977/76‑1 TGATTCATTAAAAAATAAAAACAAAAAAACTA‑TTGTATTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTA < 2:19774/76‑1 TATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCA > 1:75577/1‑76 TATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCA > 1:39132/1‑76 TATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCA < 2:575191/76‑1 TATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCA < 2:575212/76‑1 ATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAG > 1:1021778/1‑76 TTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGG < 2:1603203/76‑1 TTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGG < 1:1138248/76‑1 CGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2039267‑2039188‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctattTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGG > REL606/2039561‑2039634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |