| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2039188 = | 35 (0.590) | 11 (0.200) | 9/140 | 4.8 | 14.1% | coding (507/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | 2039561 = | 102 (1.840) | coding (134/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAA > REL606/2039114‑2039263 | aCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACaa < 1:43796/76‑1 (MQ=255)aCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACaa < 1:1609730/76‑1 (MQ=255)aCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACaa < 1:1770230/76‑1 (MQ=255)aCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACaa < 1:1770251/76‑1 (MQ=255) cTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAg < 1:871389/76‑1 (MQ=255) tGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGt > 1:1571766/1‑76 (MQ=255) gCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGttt < 1:1451480/76‑1 (MQ=255) gCTTGCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCGACTCCCAGAATAAAATACAATAGttt < 1:563668/76‑1 (MQ=255) atatatGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGtttt > 1:1619002/1‑76 (MQ=255) tGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAttt < 1:1825619/76‑1 (MQ=255) tGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAtttttt < 1:1296935/76‑1 (MQ=255) tGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAtttttt > 2:491656/1‑76 (MQ=255) gCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTa < 1:621277/76‑1 (MQ=255) aTGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGa > 1:431731/1‑76 (MQ=255) cTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTTATGAATTaa > 1:1090391/1‑76 (MQ=255) atttATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGt > 2:1438066/4‑76 (MQ=255) aTTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTcac > 1:538664/1‑76 (MQ=255) gaaTGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATAtt > 2:1535523/2‑76 (MQ=255) gCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACt > 1:812519/1‑76 (MQ=255) tACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACtata < 1:340765/76‑1 (MQ=255) tACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACtata < 1:1258397/76‑1 (MQ=255) cTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATAtt > 1:289080/1‑76 (MQ=255) tCCCAGAATAAAATACAATAGTTTTTTTGTTTTTTTTTTTTAATAAATCAAGATGTTCACAATATTCACTATAttt > 1:1255821/1‑76 (MQ=255) ccAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTAt < 1:1333378/76‑1 (MQ=255) gAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTg < 2:567327/76‑1 (MQ=255) aaaaTACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGgatg < 1:456583/76‑1 (MQ=255) aaaaTACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGgatg > 2:1146992/1‑76 (MQ=255) aaaaTACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGgatg > 2:1146999/1‑76 (MQ=255) aaaaTACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGgatg > 2:1603793/1‑76 (MQ=255) aaTACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGgatgat < 2:1811570/76‑1 (MQ=255) aTACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATc > 1:598810/1‑76 (MQ=255) aTACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATc > 1:598796/1‑76 (MQ=255) tACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCa > 1:222304/1‑76 (MQ=255) tACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCa < 1:1780349/76‑1 (MQ=255) caaaTAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCAt > 2:361676/3‑76 (MQ=255) aCAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCAt < 1:439761/76‑1 (MQ=255) aaTAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATaa > 2:354923/1‑76 (MQ=255) aaTAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATaa < 1:1479991/76‑1 (MQ=255) | ACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAA > REL606/2039114‑2039263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |