| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3021002 | 120 (2.020) | 13 (0.240) | 9/136 | 4.6 | 12.5% | coding (482/933 nt) | ECB_02820 | hypothetical protein |
| ? | REL606 | = 3021158 | 73 (1.360) | coding (326/933 nt) | ECB_02820 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAG > REL606/3021083‑3021233 | ggAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGaaa > 1:113888/1‑76 (MQ=255) aaaCGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACt > 2:727402/1‑76 (MQ=255) aaaCGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACt < 1:1199989/76‑1 (MQ=255) aaCGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTa < 1:646489/76‑1 (MQ=255) cGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCAGAAGAAACTaaa > 1:798523/1‑76 (MQ=255) gTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAAt < 2:325160/76‑1 (MQ=255) gTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAAt < 1:1096318/76‑1 (MQ=255) gTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAAt > 1:610288/1‑76 (MQ=255) gTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAAt > 1:610278/1‑76 (MQ=255) gTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAAt > 1:1515009/1‑76 (MQ=255) tttGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATa > 2:505597/1‑76 (MQ=255) tttGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATa < 2:1377142/76‑1 (MQ=255) ttGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATAc < 1:1064142/76‑1 (MQ=255) tgctgcTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATatt < 2:925214/76‑3 (MQ=255) ctgctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCa < 2:23831/76‑1 (MQ=255) ctgctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCa < 2:1805684/76‑1 (MQ=255) ctgctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCa > 1:1798829/1‑76 (MQ=255) ctgctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCa > 1:1798842/1‑76 (MQ=255) tgctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCAt > 1:1458515/1‑76 (MQ=255) tgctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCAt < 2:507614/76‑1 (MQ=255) tgctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCAt < 1:1084234/76‑1 (MQ=255) tgctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCAt < 2:1389553/76‑1 (MQ=255) gctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCAtt < 1:1893722/76‑1 (MQ=255) gctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCAtt < 2:720014/76‑1 (MQ=255) gATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCt > 2:1148767/1‑76 (MQ=255) atatTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCta > 2:322258/1‑76 (MQ=255) tatTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCtat < 1:1761876/76‑1 (MQ=255) tatTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCtat < 1:968107/76‑1 (MQ=255) atTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCtata > 2:799821/1‑76 (MQ=255) tttAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATaa < 2:116429/76‑1 (MQ=255) tttAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATaa > 1:700583/1‑76 (MQ=255) tAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATc > 1:467430/1‑76 (MQ=255) aGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCaaa < 1:1124119/76‑1 (MQ=255) aGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCaaa < 1:188434/76‑1 (MQ=255) gTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCaaaa > 1:814366/1‑76 (MQ=255) tGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAg > 1:299112/1‑76 (MQ=255) tGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAg > 1:1711966/1‑76 (MQ=255) tGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAg > 2:747059/1‑76 (MQ=255) tGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAg < 1:725244/76‑1 (MQ=255) gCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGt < 2:1220819/76‑1 (MQ=255) cGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGtt > 1:670588/1‑76 (MQ=255) gTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTa > 1:440578/1‑76 (MQ=255) tGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTaa > 2:118979/1‑76 (MQ=255) gATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTaaa < 2:113888/76‑1 (MQ=255) aTAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAATTA‑CCATTGGTTTTATTAAAAATTAAAcc > 1:1679655/1‑76 (MQ=255) aTAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAAc > 1:1156006/1‑76 (MQ=255) aaCCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCtt > 1:1189150/1‑76 (MQ=255) aaCCATCCCTGGGAACTAAAGGCATCGCCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCtt < 1:868070/76‑1 (MQ=255) aCCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTtg > 2:1832902/1‑76 (MQ=255) ccATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTtga > 1:1220825/1‑76 (MQ=255) aTCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTtgatg > 1:536966/1‑76 (MQ=255) aTCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTtgatg > 1:1334607/1‑76 (MQ=255) aTCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTtgatg > 1:1191972/1‑76 (MQ=255) nccTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGAc > 1:1078979/2‑76 (MQ=255) gtcTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGAc > 2:1289034/3‑76 (MQ=255) cccTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGAc < 1:818432/76‑1 (MQ=255) ccTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGAcc > 1:1675147/1‑76 (MQ=255) gTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATa < 1:688997/76‑1 (MQ=255) aaCTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATaaa < 1:160296/76‑1 (MQ=255) cTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAAt > 2:500651/1‑76 (MQ=255) tAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATc > 1:198429/1‑76 (MQ=255) tAAAGGCAGCACCAGCCGAAGAAACTAAATGCCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATc < 1:12696/76‑1 (MQ=255) aaaTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATcc > 2:474564/1‑76 (MQ=255) aaTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCg < 2:605909/76‑1 (MQ=255) aaTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCg > 2:1639737/1‑76 (MQ=255) aTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGt > 1:1819667/1‑76 (MQ=255) aTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGt < 1:957169/76‑1 (MQ=255) aTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGt > 1:1819665/1‑76 (MQ=255) aTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGt > 1:1819669/1‑76 (MQ=255) tGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTa < 1:1798736/76‑1 (MQ=255) tGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCAATAAAATCCGTa > 1:484565/1‑76 (MQ=255) aTCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGa < 1:347184/76‑1 (MQ=255) aCCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTc < 2:1015945/76‑1 (MQ=255) gCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGaa < 1:1658939/76‑1 (MQ=255) gCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGaa < 2:1184507/76‑1 (MQ=255) gCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGaa < 2:945644/76‑1 (MQ=255) ccGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGaaa < 1:1051912/76‑1 (MQ=255) ccGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGaaa > 1:863507/1‑76 (MQ=255) gaagaaACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAg < 1:941987/76‑1 (MQ=255) gaagaaACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATCCTGAAAAg < 1:941985/76‑1 (MQ=255) gaaACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAAc < 1:956721/76‑1 (MQ=255) aaaCTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACa < 1:1627007/76‑1 (MQ=255) aaaCTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACa > 2:579458/1‑76 (MQ=255) aaaCTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACa < 1:1595695/76‑1 (MQ=255) aaCTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACaa < 1:1804349/76‑1 (MQ=255) aCTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAg < 1:1552004/76‑1 (MQ=255) | GGAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAG > REL606/3021083‑3021233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |