| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 2,298,775 | (GCC)3→2 | coding (306‑308/1359 nt) | glpT ← | sn‑glycerol‑3‑phosphate transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 2298769 | 2298771 | 3 | 45 [0] | [0] 45 | glpT | sn‑glycerol‑3‑phosphate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2298772 = | 0 (0.000) | 43 (0.780) | 33/138 | 0.7 | 100% | coding (311/1359 nt) | glpT | sn‑glycerol‑3‑phosphate transporter |
| ? | REL606 | = 2298768 | 0 (0.000) | coding (315/1359 nt) | glpT | sn‑glycerol‑3‑phosphate transporter | |||||
ATTTTCGAAATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2298852‑2298772‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTTGTACTGTTGTTCCTCTG < REL606/2298768‑2298694 ATTTTCGAAATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTG < 1:754258/76‑1 TTTTCGAAATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGG > 1:862475/1‑76 TTCGAAATTCATCATGGGTTCGGTATGGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCG < 2:1143135/76‑1 TTCGAAATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCG < 1:851424/76‑1 GAAATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCA < 1:356298/76‑1 AAATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAG > 2:1371381/1‑76 AATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGT > 1:1112513/1‑76 AATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGT < 2:1540796/76‑1 AATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGT < 1:653168/76‑1 AATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGT < 1:1018007/76‑1 CATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATG < 1:1406203/76‑1 CATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATG < 2:1182510/76‑1 TGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTT < 2:928706/76‑1 TGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTT < 2:119776/76‑1 GGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTA < 2:685248/76‑1 GTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCCGGGTTGATTCTGGCGGCCGGGATGTTTTTTct > 1:1669870/1‑74 GTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTAT > 1:541620/1‑76 TATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTTGCGGCAGTGATGTTGTTTATGGGCTT < 1:1371381/76‑1 TCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTG < 2:1727745/76‑1 CGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGT > 2:1884140/1‑76 TCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCA < 1:319344/76‑1 CGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCAT > 1:1228419/1‑76 GCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATG < 1:496732/76‑1 CTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGG < 1:213068/76‑1 CTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGG > 2:137467/1‑76 CTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGG > 2:1222887/1‑76 CGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGC < 1:697864/76‑1 GAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCG < 1:678104/76‑1 GAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCG > 1:44511/1‑76 GAATCCGCGCGTTTTACTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCG > 2:308697/1‑76 AATCCGCGCGTTTTCCTGCCCGCGGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGA < 1:954991/76‑1 CCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGc > 2:1278385/1‑75 GCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAG < 1:623864/76‑1 GCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAG < 2:147411/76‑1 GTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCA < 2:1446060/76‑1 GTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCA > 1:130346/1‑76 TTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCAT < 2:160603/76‑1 TTTTCCTGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCAT < 2:527963/76‑1 TCCTGCCCGCAGGTTTGATTCTGGCGGGAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGC < 1:1159426/76‑1 TGCCCGCAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGT < 2:44511/76‑1 CAGGTTTGATTCTGGCGGCAGTGATGTTTTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTT < 2:553367/76‑1 CAGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTT < 2:558605/76‑1 AGGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTT > 2:960734/1‑76 GGTTTGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTTG > 2:361966/1‑76 TGATTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTTGTACT > 1:1815346/1‑76 TTCTGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTTGTACTGTT < 2:41457/76‑1 TGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTTGTACTGTTGTT > 1:1119712/1‑76 GCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTTGTACTGTTGTTCCTCT < 2:130346/76‑1 CAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTTGTACTGTTGTTCCTCTG > 2:1656172/1‑76 ATTTTCGAAATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2298852‑2298772‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTTGTACTGTTGTTCCTCTG < REL606/2298768‑2298694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |