| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2038236 = | 54 (0.870) | 7 (0.120) | 5/136 | 6.4 | 8.8% | coding (713/822 nt) | wbbB | putative glycosyltransferase WbbB |
| ? | REL606 | 2038515 = | 97 (1.730) | coding (434/822 nt) | wbbB | putative glycosyltransferase WbbB | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTAAATTGTTACATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2038317‑2038236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaagatATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTGCCATTGTA > REL606/2038515‑2038589 CTAAATTGTTACATAATGATAAACAACGAATTAATGTTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGG > 1:1406608/1‑76CTAAATTGTTACATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGG > 1:643703/1‑76CTAAATTGTTACATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGG > 1:1863494/1‑76 TAAATTGTTACATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGG < 1:861647/76‑1 TAAATTGTTACATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGG > 1:1242619/1‑76 AAATTGTTACATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGA > 2:642700/1‑76 AAATTGTTACATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGA < 2:1933705/76‑1 AAATTGTTACATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGA < 2:1413685/76‑1 TGTTACATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGAAGAT > 1:1581273/1‑76 TGTTACATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGAAGAT > 1:527310/1‑76 TGTTACATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGAAGAT > 1:527290/1‑76 ATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGAAGATATATAG < 2:1301296/76‑1 ATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGAAGATATATAG < 2:1301303/76‑1 TAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGAAGATATATAGC < 2:202337/76‑1 AACAACGAATTAATATTGTAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGAAGATATATAGCCATTCATA < 2:628952/76‑1 AACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGAAGATATATAGCCATTCATA < 2:146859/76‑1 TTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGAAGATATATAGCCATTCATATTATTCCAAGAGTTA < 2:1316916/76‑1 GGAACATTTCATATCAGGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAG < 2:278120/76‑1 ATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTGCCATTGT > 1:1446182/1‑76 ATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTGCCATTGT > 1:1446163/1‑76 TATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTGCCATTGTA > 1:1989978/1‑76 TATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTGCCATTGTA > 1:1721479/1‑76 CTAAATTGTTACATAATGATAAACAACGAATTAATATTAAAGCTCAATGTGTCTTCATGGAACATTTCATATCAGGGAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2038317‑2038236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaagatATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTGCCATTGTA > REL606/2038515‑2038589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |