| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2039596 | 64 (1.030) | 8 (0.150) | 6/130 | 5.7 | 12.3% | coding (99/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | = 2039906 | 59 (1.100) | coding (223/438 nt) | vioB | VioB, involved in dTDP‑N‑acetylviosamine synthesis | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGC > REL606/2039522‑2039671 | aCGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATaa < 2:883985/76‑1 (MQ=255)aCGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATaa < 2:403732/76‑1 (MQ=255)aCGTTTAATGATCCATCAAAAATAAAAGTAAATGCGATTTGGTCTGTATATTTAGATTCTTTTATTGTATTTATaa < 1:1789800/76‑1 (MQ=255)aCGTTTAATGAGCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATaa < 1:1789783/76‑1 (MQ=255) tttAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGAt > 2:1291228/1‑76 (MQ=255) tttAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGAt > 1:380074/1‑76 (MQ=255) ttAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGAtt < 1:1534287/76‑1 (MQ=255) ttAATGATCCATCAAAAATAAAACTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGAtt < 1:1534270/76‑1 (MQ=255) tAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGAttt < 1:973987/76‑1 (MQ=255) aaTGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTta > 1:1626483/1‑76 (MQ=255) aTGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTtat < 1:179209/76‑1 (MQ=255) aTGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATCtat > 1:459321/1‑76 (MQ=255) aTCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATaaa > 1:593645/1‑76 (MQ=255) ccATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAAc > 1:735454/1‑76 (MQ=255) tgtaaaaaTAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACaa > 2:926852/4‑76 (MQ=255) tgtaaaaaTAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACaa > 2:926828/4‑76 (MQ=255) aTCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACaa > 1:839466/1‑76 (MQ=255) aaaaaTAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAAttt > 2:1793150/1‑76 (MQ=255) aaaTAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTc > 1:607250/1‑76 (MQ=255) aaaaGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGa > 2:1992740/1‑76 (MQ=255) gTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTaa < 1:1963721/76‑1 (MQ=255) tAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTaaa < 2:824881/76‑1 (MQ=255) tAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTaaa < 1:584907/76‑1 (MQ=255) aaaTGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAAc > 2:271141/1‑76 (MQ=255) aTGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCa > 2:1629703/1‑76 (MQ=255) aTGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCa > 2:1450308/1‑76 (MQ=255) cTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTc > 1:1924777/1‑76 (MQ=255) cTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTc > 2:1718798/1‑76 (MQ=255) tATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCa > 1:967123/1‑76 (MQ=255) aTTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAg < 1:752043/76‑1 (MQ=255) aTTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAg > 1:432665/1‑76 (MQ=255) aTTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAg < 1:217184/76‑1 (MQ=255) aTTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAg > 2:245443/1‑76 (MQ=255) ttGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGc > 1:1250296/1‑76 (MQ=255) ttGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGc > 1:1250281/1‑76 (MQ=255) ggTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCg > 1:1867670/1‑76 (MQ=255) ggTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCg > 1:1052599/1‑76 (MQ=255) cTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGatt > 1:556887/1‑76 (MQ=255) cTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGatt > 1:457597/1‑76 (MQ=255) tttATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGatta > 1:1419719/1‑76 (MQ=255) tttATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGatta > 1:227965/1‑76 (MQ=255) tttATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGatta > 1:516175/1‑76 (MQ=255) tttATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGatta > 1:1615432/1‑76 (MQ=255) ttATATTTAGTTTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGattat > 1:627792/1‑76 (MQ=255) ttATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGattat > 1:334966/1‑76 (MQ=255) ttATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGattat > 1:627812/1‑76 (MQ=255) atatTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTAttt > 2:566831/1‑76 (MQ=255) atTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTAttttt < 2:1326816/76‑1 (MQ=255) ttAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAg > 1:154230/1‑76 (MQ=255) ttAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAg > 1:1058123/1‑76 (MQ=255) tAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGt > 1:1072991/1‑76 (MQ=255) tAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGt > 1:1072989/1‑76 (MQ=255) aGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGtt > 1:609527/1‑76 (MQ=255) gATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTg > 2:1208740/1‑76 (MQ=255) ttCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTc < 1:1921345/76‑1 (MQ=255) cTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCg > 1:884965/1‑76 (MQ=255) ttttattttaTTTAAAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGa < 1:448978/76‑1 (MQ=255) ttttATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGCCCGa < 1:448995/76‑1 (MQ=255) gTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGTCGATTATTTTTAGTTGTCCGACTAatat < 2:1266460/76‑1 (MQ=255) gTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGTCGATTATTTTTAGTTGTCCGACTAatat < 2:1266446/76‑1 (MQ=255) tataAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTa > 2:681595/1‑76 (MQ=255) taAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATg < 1:857461/76‑1 (MQ=255) aaGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGc > 2:363775/1‑76 (MQ=255) aaGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGc < 1:1651027/76‑1 (MQ=255) | ACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGC > REL606/2039522‑2039671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |