| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 21891 = | 46 (0.840) | 8 (0.160) | 6/134 | 5.3 | 13.4% | intergenic (‑116/+317) | ECB_00021/ECB_00022 | putative usher protein/conserved hypothetical protein |
| ? | REL606 | 22087 = | 62 (1.270) | intergenic (‑312/+121) | ECB_00021/ECB_00022 | putative usher protein/conserved hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATCACATAATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/21973‑21891‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgccatTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTGAATTAATAAT > REL606/22087‑22161 ATCACATAATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGG > 2:1095849/1‑76ATCACATAATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGG > 2:1598788/1‑76 CACATAATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGT > 2:502790/1‑76 ACATAATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTG > 1:640924/1‑76 CATAATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGC > 1:1741205/1‑76 CATAATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGC > 2:1723886/1‑76 ATAATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCC > 1:751587/1‑76 ATAATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCC > 2:175624/1‑76 ATAATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCC > 2:1235874/1‑76 ATAATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCC > 2:1508539/1‑76 AATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCCAT > 2:1053653/1‑76 AATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCCAT < 2:52070/76‑1 CGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCCATTAT < 2:135087/76‑1 TACGATTATATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCCATTATTAGA < 2:664486/76‑1 CGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCCATTATTAGAGT < 2:74917/76‑1 ATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCCATTATTAGAGTGA < 2:1128807/76‑1 TCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCCATTATTAGAGTGAGAGAGT < 2:98180/76‑1 TCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCCATTATTAGAGTGAGAGAGT < 2:395770/76‑1 CCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCCATTATTAGAGTGAGAGAGTA < 2:1135361/76‑1 CGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCCATTATTAGAGTGAGAGAGTgg < 2:325413/76‑3 TGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTGAATTA < 1:1168868/76‑1 CCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTGAATTAAT > 1:163672/1‑76 ATTAGTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTGAATTAATAA < 2:60487/76‑1 TTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTGAATTAATAAT > 1:1323172/1‑76 ATCACATAATCGGGTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGTGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/21973‑21891‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgccatTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTGAATTAATAAT > REL606/22087‑22161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |