| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 21891 = | 46 (0.840) | 8 (0.160) | 6/134 | 5.3 | 13.4% | intergenic (‑116/+317) | ECB_00021/ECB_00022 | putative usher protein/conserved hypothetical protein |
| ? | REL606 | 22087 = | 62 (1.270) | intergenic (‑312/+121) | ECB_00021/ECB_00022 | putative usher protein/conserved hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTTCTTGATGTGAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTGAATTAATAAT > REL606/22013‑22161 | tttCTTGATGTGAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCatta > 1:581858/1‑76 (MQ=255)tttCTTGATGTGAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCatta > 2:313130/1‑76 (MQ=255) ttCTTGATGTGAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCattat < 1:626392/76‑1 (MQ=255) ttCTTGATGTGAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCattat < 1:857484/76‑1 (MQ=255) ttCTTGATGTGAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCattat < 1:135087/76‑1 (MQ=255) tGATGTGAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTaga < 1:664486/76‑1 (MQ=255) aTGTGAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGt > 1:390519/1‑76 (MQ=255) aTGTGAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGt < 1:74917/76‑1 (MQ=255) aTGTGAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGt < 2:174601/76‑1 (MQ=255) aTGTGAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGt > 2:61702/1‑76 (MQ=255) tgtgAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTg < 2:583512/76‑1 (MQ=255) tgtgAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTg > 1:199952/1‑76 (MQ=255) gtgAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTga < 2:588619/76‑1 (MQ=255) gtgAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTga < 1:1128807/76‑1 (MQ=255) gtgAACTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTga > 1:7853/1‑76 (MQ=255) gAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTgaga > 2:1026188/1‑76 (MQ=255) aaGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTgagag < 1:1717413/76‑1 (MQ=255) ttGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGt < 1:395770/76‑1 (MQ=255) ttGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGt < 1:98180/76‑1 (MQ=255) tgatgaAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCTATTATTAGAGTGAGAGAGTa < 1:1135361/76‑1 (MQ=255) tgatgaAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTa > 1:315583/1‑76 (MQ=255) gatgaAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAg < 1:325413/76‑1 (MQ=255) aaGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGt < 2:302159/76‑1 (MQ=255) aGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGtt < 2:1245516/76‑1 (MQ=255) aGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGtt < 1:253049/76‑1 (MQ=255) tttAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTc < 2:1533002/76‑1 (MQ=255) tttAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTc > 1:1449898/1‑76 (MQ=255) ttAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCa > 1:941539/1‑76 (MQ=255) tAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCag < 1:103306/76‑1 (MQ=255) tAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCag > 2:1715634/1‑76 (MQ=255) tAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCag < 1:1472818/76‑1 (MQ=255) tAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCag > 1:1636843/1‑76 (MQ=255) atatTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCagag < 2:266283/76‑1 (MQ=255) tatTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGt < 2:91181/76‑1 (MQ=255) tatTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGt < 1:728202/76‑1 (MQ=255) tCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATg < 1:270971/76‑1 (MQ=255) tCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATg < 2:464554/76‑1 (MQ=255) tAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCtt > 2:1372526/1‑76 (MQ=255) aaTTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTc < 2:809485/76‑1 (MQ=255) attattCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCa < 2:89995/76‑1 (MQ=255) attattCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCa > 2:1064585/1‑76 (MQ=255) tCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGatta < 2:413524/76‑1 (MQ=255) cccTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGattat < 2:349997/76‑1 (MQ=255) cccTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGattat > 2:1469513/1‑76 (MQ=255) cccTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGattat > 1:436465/1‑76 (MQ=255) ttcttTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTAtttt < 2:100142/76‑1 (MQ=255) ttcttTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTAtttt < 1:162673/76‑1 (MQ=255) tcttTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTAttttt > 2:955210/1‑76 (MQ=255) cttTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTAtttttt < 2:1098185/76‑1 (MQ=255) ttATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTAt > 1:60569/1‑76 (MQ=255) tataAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTAtt > 2:257641/1‑76 (MQ=255) tataAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTAtt > 1:506461/1‑76 (MQ=255) ataAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTc > 2:1429068/1‑76 (MQ=255) taAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTcc > 1:1260460/1‑76 (MQ=255) taAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTcc > 2:1152247/1‑76 (MQ=255) taAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTcc > 1:1260444/1‑76 (MQ=255) aagaagAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCct > 2:703355/1‑76 (MQ=255) aagaagAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCct > 2:703362/1‑76 (MQ=255) agaagaGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCctc < 2:1027528/76‑1 (MQ=255) agagCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGt < 2:206309/76‑1 (MQ=255) gagCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTa < 2:705190/76‑1 (MQ=255) cAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTg > 1:310947/1‑76 (MQ=255) tGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTGAATta < 1:1168868/76‑1 (MQ=255) ccATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTGAATtaat > 1:163672/1‑76 (MQ=255) attagtAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTGAATtaataa < 2:60487/76‑1 (MQ=255) ttattaGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTGAATTaataat > 1:1323172/1‑76 (MQ=255) | TTTCTTGATGTGAAGTTGATGAAAGTTTAATATTCTTAATTATTCCCTTCTTTATAAGAAGAGCAAGGTGCCATTATTAGAGTGAGAGAGTAGGATGTTTCAGAGTATGCTTCAGATTATTTTTTATTCCTCTGTAGTGAATTAATAAT > REL606/22013‑22161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |