New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2038833 | 30 (0.550) | 7 (0.140) | 6/134 | 5.3 | 21.6% | coding (116/822 nt) | wbbB | putative glycosyltransferase WbbB |
? | REL606 | = 2039157 | 24 (0.490) | coding (538/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
Rejected: Coverage evenness skew score above cutoff. |
AAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCTTCATTGTAATCTGTTCTACTATATGATTATTGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2038754‑2038833 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attggaaaATAGCACCAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAA < REL606/2039157‑2039098 AAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCTTCATTGTAATCTGTTCTACTATATGATTATTG < 1:278652/76‑1 ATTGTAGTCTGTTCTACTATATGATTATTGGAAAATAGCACCAAGTACATGTGCAACATATATTATGAAAGCCAGG > 2:74377/1‑76 ATTGTAATCTGTTCTACTATATGATTATTGGAAAATAGCACCAAGTACATGTGCAACATATATTATGAAAGCCAGG > 2:74368/1‑76 TGTTCTACTATATGATTATTGGAAAATAGCACCAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGAT > 2:147757/1‑76 TTCTACTATATGATTATTGGAAAATAGCACCAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAG > 2:162009/1‑76 CTACTATATGATTATTGGAAAATAGCACCAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGA > 2:902923/1‑76 ACTATATGATTATTGGAAAATAGCACCAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACA > 2:1725203/1‑76 ATATGATTATTGGAAAATAGCACCAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAA > 2:822238/1‑76 AAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCTTCATTGTAATCTGTTCTACTATATGATTATTGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2038754‑2038833 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attggaaaATAGCACCAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAA < REL606/2039157‑2039098 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |