| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2114544 | 74 (1.410) | 3 (0.070) | 3/132 | 6.3 | 4.1% | coding (130/1968 nt) | ECB_02001 | hypothetical protein |
| ? | REL606 | = 2115058 | 75 (1.630) | intergenic (‑20/+116) | ECB_02002/ECB_02003 | hypothetical protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TACTTCAAGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAATTAATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2114461‑2114544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attaataaaATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAAAATTGATTGTGCTCTTACAGTTTCGGGGAAAAA < REL606/2115058‑2114986 TACTTCAAGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAA > 1:132904/1‑76TACTTCAAGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAA < 1:737092/76‑1 TCAAGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAATTAA > 2:1215077/1‑76 TCAAGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAATTAA > 2:286482/1‑76 TCAAGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAATTAA > 2:286478/1‑76 TCAAGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAATTAA < 2:1008293/76‑1 CAAGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAATTAAT > 2:1520218/1‑76 CAAGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAATTAAT < 2:1296221/76‑1 CAAGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAATTAAT < 2:1296241/76‑1 AAGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAATTAATA > 1:1634247/1‑76 AGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAATTAATAA < 1:899666/76‑1 GAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAATTAATAAA < 2:1188708/76‑1 ATCTATAGAACTAGCACCTAAAAGATAATTAATAAAATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAA > 2:894220/1‑76 CTATAGAACTAGCACCTAAAAGATAATTAATAAAATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAAAA > 2:375962/1‑76 AACTAGCACCTAAAAGATAATTAATAAAATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAAAATTGATT > 2:958521/1‑76 ATTAATAAAATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAAAATTGATTGTGCTCTTACAGTTTCGGG > 1:918659/1‑76 TTAATAAAATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAAAATTGATTGTGCTCTTACAGTTTCGGGG > 2:613410/1‑76 aagAAAATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAAAATTGATTGTGCTCTTACAGTTTCGGGGAA < 2:1071999/73‑1 AATAAAATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAAAATTGATTGTGCTCTTACAGTTTCGGGGAA > 2:265273/1‑76 AATAAAATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAAAATTGATTGTGCTCTTACAGTTTCGGGGAA > 2:582088/1‑76 TAAAATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAAAATTGATTGTGCTCTTACAGTTTCGGGGAAAA > 2:1128793/1‑76 AAAATACAAATTTTTATGTATCTGTGATAAAAAATCCGTCAAAAATTGATTGTGCTCTTACAGTTTCGGGGAAAAA > 1:311306/1‑76 AAAATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAAAATTGATTGTGCTCTTACAGTTTCGGGGAAAAA > 1:1070896/1‑76 AAAATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAAAATTGATTGTGCTCTTACAGTTTCGGGGAAAAA > 1:719316/1‑76 TACTTCAAGAGCAGCATAGTTTACTGATGTTTTTATTTCATCTGCTAAATCTATAGAACTAGCACCTAAAAGATAATTAATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2114461‑2114544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attaataaaATACAAATTTTTATGTATCTGTGATAAAAAATCCATCAAAAATTGATTGTGCTCTTACAGTTTCGGGGAAAAA < REL606/2115058‑2114986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |