| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3022200 = | 45 (0.910) | 10 (0.210) | 5/142 | 5.2 | 14.8% | coding (485/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | 3022657 = | 73 (1.560) | coding (28/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATCAGGTATATTCACTCAGTACGATATCAACAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3022277‑3022200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atatATATATAATATAGGCTATTATTGGACATAATGTATGCCCCTTGTATTTATTGTCATATTAACATCTATTTATTT > REL606/3022657‑3022730 ATCAGGTATATTCACTCAGTACGATATCAACAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAAT > 1:565094/1‑76 TCAGGTATATTCACTCAGTACGATATCAACAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATA < 2:1527492/76‑1 CAGGTATATTCACTCAGTACGATATCAACAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATAT > 1:1243149/1‑76 CAGGTATATTCACTCAGTACGATATCAACAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATAT > 2:324124/1‑76 CAGGTATATTCACTCAGTACGATATCAACAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATAT > 1:89679/1‑76 CAGGTATATTCACTCAGTACGATATCAACAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATAT > 1:949710/1‑76 CAGGTATATTCACTCAGTACGATATCAACAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATAT > 1:949711/1‑76 ATTCACTCAGTACGATATCAACAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATATATATATA < 2:979317/76‑1 ACTCAGTACGATATCAACAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATATATATATAATAT < 2:791602/76‑1 ACTCAGTACGATATCAACAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATATATATATAATAT < 2:791621/76‑1 CAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATATATATATAATATAGGCTATTATTGGACAT < 2:1011573/76‑1 CAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATATATATATAATATAGGCTATTATTGGACAT < 2:1011589/76‑1 GGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATATATATATAATATAGGCTATTATTGGACATAATGT < 2:1429956/76‑1 GGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATATATATATAATATAGGCTATTATTGGACATAATGT < 2:1429958/76‑1 GGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATATATATATAATATAGGCTATTATTGGACATAATGT < 2:1429971/76‑1 GGAAAGTGCTAAAATGAGTCGATACTTTTATCGGTAGCAATATATATATAATATAGGCTATTATTGGACATAATGT < 2:1429983/76‑1 AAATTAGGCGATACTTTTATCGGTAGCAATATATATATAATATAGGCTATTATTGGACATAATGTATGCCCCTTGT < 2:1449425/76‑1 ATATATATATAATATAGGCTATTATTGGACATAATGTATGCCCCTTGTATTTATTGTCATATTAACATCTATTTAT > 1:568196/1‑76 ATATATATATAATATAGGCTATTATTGGACATAATGTATGCCCCTTGTATTTATTGTCATATTAACATCTATTTAT > 1:568195/1‑76 TATATATATAATATAGGCTATTATTGGACATAATGTATGCCCCTTGTATTTATTGTCATATTAACATCTATTTATT < 1:55732/76‑1 ATATATATAATATAGGCTATTATTGGACATAATGTATGCCCCTTGTATTTATTGTCATATTAACATCTATTTATTT > 2:1382854/1‑76 ATCAGGTATATTCACTCAGTACGATATCAACAATGGGAAAGTGCTAAAATTAGGCGATACTTTTATCGGTAGCAATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3022277‑3022200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atatATATATAATATAGGCTATTATTGGACATAATGTATGCCCCTTGTATTTATTGTCATATTAACATCTATTTATTT > REL606/3022657‑3022730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |