New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	= 242725	15 (0.380)	4 (0.120)	3/132	5.1	16.6%	intergenic (+343/‑88)	ECB_00212/yhhI	hypothetical protein/predicted transposase
	?	REL606	= 719050	27 (0.780)					coding (66/762 nt)	ybfD	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATGGTAGTGAGCGCAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTATTG  >  REL606/242650‑242768                                                                            |                                            aTGGTAGTGAGCGCAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGttt                                             >  1:225634/1‑76 (MQ=255)  tGGTAGTGAGCGCAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTa                                            >  1:890971/1‑76 (MQ=255)          aGCGCAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTga                                    <  1:1099476/76‑1 (MQ=255)             gcaggggcagggAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGat                                 <  1:822207/76‑1 (MQ=255)              caggggcagggAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGata                                <  2:713170/76‑1 (MQ=255)               aggggcagggAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGatat                               <  1:74411/76‑1 (MQ=255)                 gggcagggAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTc                             <  2:962916/76‑1 (MQ=255)                     agggAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCa                         <  1:7464/76‑1 (MQ=255)                       ggAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCAtt                       <  1:757825/76‑1 (MQ=255)                           aGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCt                   <  2:430596/76‑1 (MQ=255)                           aGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCCCATTACCt                   <  1:1209394/76‑1 (MQ=255)                            gATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTg                  <  1:689946/76‑1 (MQ=255)                               cACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAg               <  1:613900/76‑1 (MQ=255)                               cACGTAACGCTGAGTGTGTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAg               <  1:613926/76‑1 (MQ=14)                                 cGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCt             >  1:1117866/1‑76 (MQ=255)                                            ttttttGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTATTg  >  2:747992/1‑76 (MQ=31)                                                                            |                                            ATGGTAGTGAGCGCAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTATTG  >  REL606/242650‑242768

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.