New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	= 242725	15 (0.380)	4 (0.120)	3/132	5.1	16.6%	intergenic (+343/‑88)	ECB_00212/yhhI	hypothetical protein/predicted transposase
	?	REL606	= 719050	27 (0.780)					coding (66/762 nt)	ybfD	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGTTTCTGGTGCAGAAGGCTGGGAAGATAT  >  REL606/718976‑719124                                                                           |                                                                           gagaACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGa                                                                           <  1:830472/76‑1 (MQ=35)  ataaCAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGaa                                                                          <  1:474138/74‑1 (MQ=38)  agaACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGaa                                                                          <  2:90312/76‑1 (MQ=38)  agaACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGaa                                                                          <  2:90297/76‑1 (MQ=38)   gaACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGaaa                                                                         <  1:294354/76‑1 (MQ=39)    aaCAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAAc                                                                        >  2:825224/1‑76 (MQ=39)      cAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACAt                                                                      >  2:247097/1‑76 (MQ=39)      cAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACAt                                                                      >  2:247088/1‑76 (MQ=39)        aaaTGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATaa                                                                    >  1:736117/1‑76 (MQ=39)        aaaTGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATaa                                                                    >  1:736132/1‑76 (MQ=39)            ggAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTg                                                                >  1:1220773/1‑76 (MQ=40)               atttAAAAATTTGATGGATCATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCg                                                             <  2:507152/74‑1 (MQ=14)                cTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCgg                                                            <  1:712976/76‑1 (MQ=255)                       aaTTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCt                                                     <  1:231527/76‑1 (MQ=255)                       aaTTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCt                                                     >  2:54752/1‑76 (MQ=255)                         ttGATGGAACATATTTCTATTATTCCCGATTACGGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTAc                                                   >  1:1062745/1‑76 (MQ=255)                         ttGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTAc                                                   >  2:860511/1‑76 (MQ=255)                             tGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGtt                                               <  1:837161/76‑1 (MQ=255)                             tGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGtt                                               <  1:837168/76‑1 (MQ=255)                             tGGAACACATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGtt                                               <  1:837151/76‑1 (MQ=255)                              ggAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTg                                              >  1:954325/1‑76 (MQ=255)                                      tttCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGTTATTCTACTGTTGACTATTTa                                      <  1:1032888/76‑1 (MQ=255)                                      tttCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTa                                      <  1:1032875/76‑1 (MQ=255)                                         cTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGc                                   >  1:566352/1‑76 (MQ=255)                                           attattCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTg                                 <  1:400082/76‑1 (MQ=255)                                           attattCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTg                                 >  2:806613/1‑76 (MQ=255)                                               ttCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGt                             >  1:602909/1‑76 (MQ=255)                                                tCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGtt                            <  2:500427/76‑1 (MQ=255)                                                     aTTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGTTTCTgg                       >  1:1014278/1‑76 (MQ=255)                                                     aTTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGTTTCTgg                       >  1:1014280/1‑76 (MQ=255)                                                     aTTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGTTTCTgg                       >  2:831645/1‑76 (MQ=255)                                                          aGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGTTTCTGGTGCAg                  >  2:78773/1‑76 (MQ=255)                                                             cAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGTTTCTGGTGCAGAAg               >  2:293829/1‑76 (MQ=255)                                                              aaaCCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGTTTCTGGTGCAGAAgg              <  2:851126/76‑1 (MQ=255)                                                                   tGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGTTTCTGGTGCAGAAGGCTggg         >  1:813118/1‑76 (MQ=255)                                                                          tGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGTTTCTGGTGCAGAAGGCTGGGAAGatat  >  1:448097/1‑76 (MQ=255)                                                                          tGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGTTTCTGGTGCAGAAGGCTGGGAAGataa  >  1:448104/1‑75 (MQ=255)                                                                           |                                                                           GAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGACAAACCTGGAAAGTGAAACATAAATTGTCGGATATTCTACTGTTGACTATTTACGCTGTCGTTTCTGGTGCAGAAGGCTGGGAAGATAT  >  REL606/718976‑719124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.