New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	570024 =	9 (0.230)	4 (0.120)	3/132	5.1	18.6%	intergenic (‑88/+591)	yhhI/ECB_00526	predicted transposase/hypothetical protein
	?	REL606	= 719050	27 (0.780)					coding (66/762 nt)	ybfD	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAAAAACAGCTTCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCC  >  REL606/569985‑570090                                        |                                                                   aaaaaaCAGCTTCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGaa                                >  2:989882/1‑76 (MQ=34)         gCTTCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCtgat                        <  1:1203516/76‑1 (MQ=34)                gTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCttt                 >  1:829488/1‑76 (MQ=34)                 taataaGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCtttt                >  2:679351/1‑76 (MQ=35)                 taataaGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCtttt                >  2:773511/1‑76 (MQ=35)                 taataaGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCtttt                >  2:773512/1‑76 (MQ=35)                   ataaGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTcc              >  1:1170382/1‑76 (MQ=39)                               tcAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATcc  <  2:285958/76‑1 (MQ=255)                               tcAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATcc  <  2:285966/76‑1 (MQ=255)                                        |                                                                   AAAAAACAGCTTCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCC  >  REL606/569985‑570090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.