New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2039480 | 32 (0.670) | 6 (0.140) | 6/134 | 4.3 | 20.5% | coding (215/747 nt) | wbbA | putative glycosyltransferase WbbA |
? | REL606 | = 2039680 | 18 (0.420) | coding (15/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
Rejected: Coverage evenness skew score above cutoff. |
AGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATG > REL606/2039408‑2039555 | aGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGa > 2:543146/1‑76 (MQ=255) tCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAgt < 1:1271230/76‑1 (MQ=255) gCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGAtata > 2:38137/1‑76 (MQ=255) cTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATaa < 2:942998/76‑1 (MQ=255) ttGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACg < 1:600255/76‑1 (MQ=255) ttGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACg < 1:1381702/76‑1 (MQ=255) ttGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACg < 1:1381691/76‑1 (MQ=255) tGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTa < 2:871368/76‑1 (MQ=255) tGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTa > 2:75687/1‑76 (MQ=255) aTCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAg < 1:1262771/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:734926/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:1184493/76‑1 (MQ=255) ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa < 1:288138/76‑1 (MQ=255) aTTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACg < 1:8503/76‑1 (MQ=255) aTTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATACAACGGATCTAAGGAACCAACg < 1:8525/76‑1 (MQ=255) tGATTATGAATATCTTTTTATTATACATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGtt > 1:616691/1‑76 (MQ=255) aTTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTa > 1:1305723/1‑76 (MQ=255) ttATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTaa > 1:873295/1‑76 (MQ=255) aTGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATg > 1:324964/1‑76 (MQ=255) tGAATATCTTTTTATTACTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGa > 1:308449/1‑76 (MQ=255) atatCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATcc > 2:266597/1‑76 (MQ=255) tatCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCa > 1:704762/1‑76 (MQ=255) atCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCAt > 1:963314/1‑76 (MQ=255) tttttATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCaa > 1:54456/1‑76 (MQ=255) ttttATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCaaa < 1:845636/76‑1 (MQ=255) tattatTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAAt < 1:1037523/76‑1 (MQ=255) attCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATaaaa < 1:466474/76‑1 (MQ=255) tCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGt < 1:1136245/76‑1 (MQ=255) atatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaa < 1:187900/76‑1 (MQ=255) tatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaaa < 1:166697/76‑1 (MQ=255) atCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAAt < 1:861106/76‑1 (MQ=255) tCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATg < 1:1127290/76‑1 (MQ=255) | AGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATG > REL606/2039408‑2039555 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |