New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 203948032 (0.670)6 (0.140) 6/134 4.3 20.5% coding (215/747 nt) wbbA putative glycosyltransferase WbbA
?REL606 = 2039680 18 (0.420)coding (15/747 nt) wbbA putative glycosyltransferase WbbA
Rejected: Coverage evenness skew score above cutoff.

AGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATG  >  REL606/2039408‑2039555
                                                                        |                                                                           
aGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGa                                                                          >  2:543146/1‑76 (MQ=255)
            tCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAgt                                                              <  1:1271230/76‑1 (MQ=255)
                     gCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGAtata                                                     >  2:38137/1‑76 (MQ=255)
                      cTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATaa                                                    <  2:942998/76‑1 (MQ=255)
                        ttGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACg                                                  <  1:600255/76‑1 (MQ=255)
                        ttGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACg                                                  <  1:1381702/76‑1 (MQ=255)
                        ttGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACg                                                  <  1:1381691/76‑1 (MQ=255)
                              tGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTa                                            <  2:871368/76‑1 (MQ=255)
                              tGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTa                                            >  2:75687/1‑76 (MQ=255)
                                aTCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAg                                          <  1:1262771/76‑1 (MQ=255)
                                    cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg                                      <  1:734926/76‑1 (MQ=255)
                                    cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg                                      <  1:1184493/76‑1 (MQ=255)
                                       ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa                                   <  1:288138/76‑1 (MQ=255)
                                         aTTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACg                                 <  1:8503/76‑1 (MQ=255)
                                         aTTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATACAACGGATCTAAGGAACCAACg                                 <  1:8525/76‑1 (MQ=255)
                                           tGATTATGAATATCTTTTTATTATACATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGtt                               >  1:616691/1‑76 (MQ=255)
                                             aTTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTa                             >  1:1305723/1‑76 (MQ=255)
                                              ttATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTaa                            >  1:873295/1‑76 (MQ=255)
                                                aTGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATg                          >  1:324964/1‑76 (MQ=255)
                                                 tGAATATCTTTTTATTACTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGa                         >  1:308449/1‑76 (MQ=255)
                                                    atatCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATcc                      >  2:266597/1‑76 (MQ=255)
                                                     tatCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCa                     >  1:704762/1‑76 (MQ=255)
                                                      atCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCAt                    >  1:963314/1‑76 (MQ=255)
                                                         tttttATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCaa                 >  1:54456/1‑76 (MQ=255)
                                                          ttttATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCaaa                <  1:845636/76‑1 (MQ=255)
                                                             tattatTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAAt             <  1:1037523/76‑1 (MQ=255)
                                                                 attCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATaaaa         <  1:466474/76‑1 (MQ=255)
                                                                   tCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGt       <  1:1136245/76‑1 (MQ=255)
                                                                     atatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaa     <  1:187900/76‑1 (MQ=255)
                                                                      tatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaaa    <  1:166697/76‑1 (MQ=255)
                                                                       atCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAAt   <  1:861106/76‑1 (MQ=255)
                                                                        tCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATg  <  1:1127290/76‑1 (MQ=255)
                                                                        |                                                                           
AGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATG  >  REL606/2039408‑2039555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.