| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2039480 | 32 (0.670) | 6 (0.140) | 6/134 | 4.3 | 20.5% | coding (215/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | = 2039680 | 18 (0.420) | coding (15/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
ACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATA > REL606/2039608‑2039743 | aCAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAaataaata < 2:671598/76‑1 (MQ=255) cAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAatat < 1:537464/76‑1 (MQ=255) aaTTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATg < 1:1213753/76‑1 (MQ=255) tttCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAAt < 1:936557/76‑1 (MQ=255) tttCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAAt > 1:37784/1‑76 (MQ=255) aaCCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGAtt < 1:1347857/76‑1 (MQ=255) aaCCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGAtt < 1:567290/76‑1 (MQ=255) aaCCACTCAGGCCGATTATTTTTAGTTATCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGAtt < 1:567294/76‑1 (MQ=255) aCTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTAtct > 2:1222598/1‑76 (MQ=255) cTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTAtctc < 1:755498/76‑1 (MQ=255) tCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTcc > 1:190987/1‑76 (MQ=255) tCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTcc > 1:1362117/1‑76 (MQ=255) ccGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAg > 2:34079/1‑76 (MQ=255) ccGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAg > 2:34089/1‑76 (MQ=255) attTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTg > 2:249047/1‑76 (MQ=255) tttttAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTgg > 1:534420/1‑76 (MQ=255) aGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTaa > 2:134668/1‑76 (MQ=255) aGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTaa < 2:616691/76‑1 (MQ=255) ttGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAAt > 2:1391564/1‑76 (MQ=255) tCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACa < 1:907427/76‑1 (MQ=255) aCTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGAtt > 1:700201/1‑76 (MQ=255) aCTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGAtt > 1:700213/1‑76 (MQ=255) aTGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCaata < 1:543146/76‑1 (MQ=255) | ACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATA > REL606/2039608‑2039743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |