| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1884735 = | 38 (0.700) | 122 (2.280) | 74/148 | 0.0 | 74.7% | coding (469/567 nt) | yebN | conserved inner membrane protein |
| ? | REL606 | = 1889406 | 45 (0.840) | coding (554/1374 nt) | yebQ | predicted transporter | |||||
Only 100 of 173 total aligned reads displayed.
CTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTG > REL606/1889331‑1889479 | ctgcAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCt > 2:1081961/1‑76 (MQ=255) tGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTt < 1:439239‑M2/76‑2 (MQ=255) tGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTt > 2:345353‑M2/1‑75 (MQ=255) cgcagcaaTCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTt > 2:1180172‑M2/2‑75 (MQ=255) gcagcaATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtt > 1:288030‑M2/1‑74 (MQ=255) cagcaATCCTCTCCATCGCATCCTGGAAATTGTTATTTTTCATCAACGTACCGTTAGGTATTATCGCCCTGCTttt > 2:1592959‑M2/1‑73 (MQ=255) cagcaATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTttt > 1:848505‑M2/1‑73 (MQ=255) agcaATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTttta < 1:319985‑M2/76‑5 (MQ=255) agcaATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTttta > 2:299824‑M2/1‑72 (MQ=255) agcaATCCTCTCCATCGCATCCTGGAAATGGTTATTGTTAATCAACGTTCCGTTAGGTATTATCGCCCTGCTttta > 2:779702‑M2/1‑72 (MQ=255) gcaATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTGCCGTTAGGTATTATCGCCCTGCTtttat > 1:1393127‑M2/1‑71 (MQ=255) gcaATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttat > 2:1226153‑M2/1‑71 (MQ=255) caATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatc > 2:586671‑M2/1‑70 (MQ=255) aaTCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcg < 2:1665638‑M2/76‑8 (MQ=255) aaTCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCg < 1:1028835/76‑1 (MQ=255) aTCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcgg < 2:937304‑M2/76‑9 (MQ=255) tCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggc < 1:1540183‑M2/76‑10 (MQ=255) ntctccATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctc < 1:1296377‑M2/75‑12 (MQ=255) ctctCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctc > 1:56439‑M2/1‑65 (MQ=255) tctcCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctca < 1:823570‑M2/76‑13 (MQ=255) tctcCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctca < 2:202933‑M2/76‑13 (MQ=255) tctcCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctca > 2:528178‑M2/1‑64 (MQ=255) ctcCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGt > 2:497575/1‑76 (MQ=255) tcCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaat < 2:216871‑M2/76‑15 (MQ=255) tcCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACAGTTAGGTATTATCGCCCTGCTtttatcggctcaat > 2:1571333‑M2/1‑62 (MQ=255) ccATCGCATCCTGNAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaatt < 1:1186602‑M2/76‑16 (MQ=255) ccATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaatt < 2:1336466‑M2/76‑16 (MQ=255) cATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattggg < 2:381825‑M2/76‑22 (MQ=255) cATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattggg > 1:254072‑M2/1‑55 (MQ=255) cATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGcc < 1:483733/76‑1 (MQ=255) aTCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattggga > 1:1658516‑M2/1‑54 (MQ=255) ccTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCAcc > 1:1047530/1‑76 (MQ=255) cTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaa > 1:1617533‑M2/1‑51 (MQ=255) ggAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaa < 1:555453‑M2/76‑28 (MQ=255) ggAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaa < 1:405538‑M2/76‑28 (MQ=255) ggAAATGATTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaa < 1:622152‑M2/76‑28 (MQ=255) gAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaag < 2:1006177‑M2/76‑29 (MQ=255) gAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaag < 1:1270890‑M2/76‑29 (MQ=255) gAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaag > 2:710362‑M2/1‑48 (MQ=255) aaTGGTTATTTTTAATCACCGTACCGTTAGCTATTTTCGCCCTGCTTCCGGCGATGCGTTTTCGGCCACCCAATgg < 2:129953/76‑1 (MQ=255) aTGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcgg > 1:639864‑M2/1‑45 (MQ=255) aTGGTTATTTTTAATCAACGTACCGTTAGGTATGATCGCCCTGCTtttatcggctcaattattgggaaaaaagcgg > 1:847445‑M2/1‑45 (MQ=255) tGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcgga < 2:861153‑M2/76‑33 (MQ=255) ggTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTtc > 1:1532271/1‑76 (MQ=255) gTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaa > 1:140244‑M2/1‑42 (MQ=255) gTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaa < 1:817279‑M2/76‑35 (MQ=255) gTTATTTCTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaa < 1:1102699‑M2/76‑35 (MQ=255) ttATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaat < 1:1003800‑M2/76‑36 (MQ=255) ttATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaat > 2:1095020‑M2/1‑41 (MQ=255) ttATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTtctc > 1:93928/1‑76 (MQ=255) tATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCGATGGTTCTcg > 2:320085/1‑76 (MQ=255) tttttAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattct > 2:421280‑M2/1‑38 (MQ=255) ttttAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctc < 2:1524151‑M2/76‑40 (MQ=255) ttttAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctc > 1:44014‑M2/1‑37 (MQ=255) ttttAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCgcgc > 1:1534147/1‑76 (MQ=255) tttAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGcc < 2:128593/76‑1 (MQ=255) tttAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGCTCTCGCGcc > 1:272436/1‑76 (MQ=255) ttAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcgg > 1:175537‑M2/1‑35 (MQ=255) tAATCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggc < 1:1200876‑M2/76‑43 (MQ=255) aaTCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcg > 1:1472583‑M2/1‑33 (MQ=255) aTCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgg < 1:1637680‑M2/76‑45 (MQ=255) tCAACGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcggg < 1:75133‑M2/76‑46 (MQ=255) tCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGaaa > 2:1117885/1‑76 (MQ=255) aaCGTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggct < 2:1409990‑M2/76‑48 (MQ=255) cGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAAccc > 2:215110/1‑76 (MQ=255) gTACCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggt > 2:1704695‑M2/1‑26 (MQ=255) tACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCg > 1:1361958/1‑76 (MQ=255) aCCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgc < 1:500512‑M2/76‑53 (MQ=255) aCCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgc < 1:183405‑M2/76‑53 (MQ=255) aCCGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggggc < 1:383716‑M2/76‑53 (MQ=255) cGTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctg < 1:1591180‑M2/76‑55 (MQ=255) gTTAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctga < 2:1051006‑M2/76‑56 (MQ=255) ttAGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgat < 1:1337983‑M2/76‑57 (MQ=255) ttAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCg > 1:1068486/1‑76 (MQ=255) tAGGAATAATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatc < 1:1143526‑M2/76‑58 (MQ=255) aGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatcg < 1:343955‑M2/76‑59 (MQ=255) aGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatcg > 2:721033‑M2/1‑18 (MQ=255) aGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatag > 2:1540183‑M2/1‑18 (MQ=255) aGGTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggggctgatcg < 2:746292‑M2/76‑59 (MQ=255) aGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGAc > 2:584703/1‑76 (MQ=255) aGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGAc > 1:677293/1‑76 (MQ=255) ggTATTATCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatcgg < 1:203371‑M2/76‑60 (MQ=255) tattatCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTg < 1:1208789/76‑1 (MQ=255) tattatCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTg > 2:40953/1‑76 (MQ=255) attatCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatcggcat < 2:951925‑M2/76‑63 (MQ=255) attatCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatcggcat < 1:893080‑M2/76‑63 (MQ=255) attatCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGCCCTGc > 2:8301/1‑76 (MQ=255) ttatCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatcggcatc < 2:327681‑M2/76‑64 (MQ=255) ttatCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGcc < 1:361759/76‑1 (MQ=255) tatCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatcggcatcg < 1:1757312‑M2/76‑65 (MQ=255) tatCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatcggcatcg < 1:1339627‑M2/76‑65 (MQ=255) tatCGCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatcggcatcg > 1:834442‑M2/1‑12 (MQ=255) gCCCTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatcggcatcggccc < 1:180039‑M2/76‑69 (MQ=255) gCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAgcg > 2:1446255/1‑76 (MQ=255) cccTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatcggcatcggcgtc < 1:1697402‑M2/76‑70 (MQ=255) ccTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggtgctgatcggcatcggcgtcn > 1:678624‑M2/1‑6 (MQ=255) cTGCTtttatcggctcaattattgggaaaaaagcggaaattctcggcgggctggggctgatcggcatcgccggcca < 1:1692004‑M2/76‑72 (MQ=255) tcTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGtg < 1:141486/75‑1 (MQ=255) gCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGtg > 2:239390/1‑76 (MQ=255) gCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAAACCCGTTTCGACCTGCCCAGCGCCGtg > 2:629878/1‑76 (MQ=255) | CTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTG > REL606/1889331‑1889479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |