| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,013,368 | IS150 (–) +3 bp | intergenic (+32/‑50) | ECB_02814 → / → ECB_02815 | conserved hypothetical protein/Capsule polysaccharide export inner‑membrane protein kpsE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2775877 | NA (NA) | 62 (1.220) | 51/150 | 0.1 | 96.8% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3013368 = | 2 (0.040) | intergenic (+32/‑52) | ECB_02814/ECB_02815 | conserved hypothetical protein/Capsule polysaccharide export inner‑membrane protein kpsE | |||||
| * | ? | REL606 | = 3013370 | 2 (0.040) | 57 (1.150) | 44/146 | 0.1 | 96.5% | intergenic (+34/‑50) | ECB_02814/ECB_02815 | conserved hypothetical protein/Capsule polysaccharide export inner‑membrane protein kpsE |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2775803‑2775877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAGTCTGCCGTATCCTGG > REL606/3013368‑3013440 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAC < 1:245967/76‑1 TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACA > 2:784321/1‑76 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACAT < 1:232425/76‑1 TCAAAAGGGCATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACAT < 1:1315752/76‑1 AAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTG < 1:1628966/76‑1 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAG < 1:353903/76‑1 GGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTT > 2:807352/1‑76 GGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTT > 2:944198/1‑76 TATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTac > 2:1037827/1‑74 TTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGC > 1:179677/1‑76 TTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCC > 2:1512647/1‑76 TTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCC > 2:500766/1‑76 GGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCA > 1:1565343/1‑76 GCTTTGACAGATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCAC < 2:1137525/76‑1 CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACT > 1:292593/1‑76 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTG < 1:1028285/76‑1 TTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGA > 1:540228/1‑76 TGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAA < 2:479418/76‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAAC > 1:201169/1‑76 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAAC < 2:264782/76‑1 CATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACT > 2:927549/1‑76 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTT < 2:368223/76‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTT > 2:902509/1‑76 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGAT > 1:441051/1‑76 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATA < 2:1251849/76‑1 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATA < 1:1368895/76‑1 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATA > 1:220989/1‑76 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGT > 2:971134/1‑76 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTT < 1:1260629/76‑1 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGGAACTTTGATAATCGTTA > 2:1536285/1‑76 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTA > 1:859396/1‑76 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTA > 1:859387/1‑76 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTA > 2:1164155/1‑76 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTA > 2:1553265/1‑76 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTAC > 1:1137191/1‑76 CATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATG > 1:1305788/1‑76 CATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATG < 2:1434208/76‑1 CATGTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATG < 2:1434216/76‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCTCCCCACTGAAACTTTGATAATCGTTACATGT > 1:791825/1‑76 TTTCATCGTCCAATAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTT > 1:531605/1‑76 TTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTG < 1:740357/76‑1 TTCATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTG < 2:249646/76‑1 CATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGAT < 1:780586/76‑1 ATCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATA < 2:994390/76‑1 TCGTCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAA < 2:248922/76‑1 TCCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAG > 2:1252644/1‑76 CCAACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGT < 1:169873/76‑1 AACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGA < 1:1158891/76‑1 AACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGA > 2:586653/1‑76 ACAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAA < 1:983275/76‑1 CAAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAG < 1:1459250/76‑1 AAAATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAGT > 2:1103342/1‑76 AATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAGTCT > 1:771893/1‑76 ATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAGTCTG < 2:226486/76‑1 ATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAGTCTG < 1:1281338/76‑1 ATGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTAGATAAAAGTGAAGTCTG > 2:806002/1‑76 TGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAGTCTGC > 2:779390/1‑76 TGGGTGCAGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAGTCTGC < 2:1340088/76‑1 AGTACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAGTCTGCCGTATCC > 1:699588/1‑76 TACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAGTCTGCCGTATCCTG < 1:991714/76‑1 TACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAGTCTGCCGTATCCTG < 2:1014501/76‑1 ACACATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAGTCTGCCGTATCCTGG < 1:395270/76‑1 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2775803‑2775877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTGAGTTTGCGCCCCACTGAAACTTTGATAATCGTTACATGTTGATAAAAGTGAAGTCTGCCGTATCCTGG > REL606/3013368‑3013440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |