| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,014,094 | (ACAGGC)3→2 | coding (675‑680/1137 nt) | ECB_02815 → | Capsule polysaccharide export inner‑membrane protein kpsE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3014087 = | 1 (0.020) | 42 (0.900) | 33/124 | 0.3 | 97.9% | coding (668/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE |
| ? | REL606 | = 3014080 | 1 (0.020) | coding (661/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE | |||||
GTCAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3014171‑3014087‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgtgcctgtgGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTT < REL606/3014080‑3014007 GTCAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCT < 1:1269715/76‑1 CAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGT > 2:258136/1‑76 CAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCC > 2:425848/1‑76 CAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCC > 1:640879/1‑76 AAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCT < 2:1415261/76‑1 AGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTG > 2:1742576/1‑76 TTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTG < 2:1021901/76‑1 TCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCNCCTGTGCCTGTGG < 1:1230951/76‑1 TCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGG > 1:1095111/1‑76 AGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCA < 2:1404986/76‑1 TCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAA < 1:1769571/76‑1 TCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAA < 2:936760/76‑1 CGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACG > 1:1023694/1‑76 CTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTT > 1:1566408/1‑76 TTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTG > 1:1287836/1‑76 TCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGTTCCAGAAGGTTGT > 2:1027046/1‑76 CCATCTGGATCTTCTGGCCCCTCAGCGTATTCCCTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTT < 1:1631159/76‑1 CATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTG > 2:1664722/1‑76 CATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTG < 1:1258404/76‑1 TGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGT < 2:1304680/76‑1 TGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGT > 2:711382/1‑76 GGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTC > 1:894699/1‑76 GATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCT < 2:1436197/76‑1 GATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCT > 1:441892/1‑76 ATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGGTGTTGTTGTCTT > 2:862282/1‑76 TCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTG < 2:297764/76‑1 TCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTG < 1:1335002/76‑1 TCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTG < 2:702933/76‑1 CTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGA < 2:1160981/76‑1 CTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAA < 1:1612994/76‑1 TGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAG > 2:124844/1‑76 CCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGA < 2:451329/76‑1 CCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGA < 2:1259134/76‑1 ATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCA > 1:774399/1‑76 GTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCG < 2:276684/76‑1 ATTCACTAACGTGCTCGCCGCCGGTGCCTGTGGATCCAGAACGGTGTTGTTGTCTTGATAAGAGAGCAATTCCGCT > 2:917221/1‑76 TTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTT < 1:1536011/76‑1 TCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTT < 1:796880/76‑1 TCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTT < 1:1057661/76‑1 CACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTG > 2:1516968/1‑76 CACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTG > 1:1121710/1‑76 CTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCT > 1:454946/1‑76 AACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGG > 2:1307981/1‑76 AACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGG > 2:1161393/1‑76 GCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCC < 1:468618/76‑1 GCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCC < 1:226854/76‑1 TCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAG < 1:280720/76‑1 GCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGAC < 2:1433486/76‑1 GCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGAC < 1:891274/76‑1 GCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCT > 1:1634135/1‑76 CCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTG > 2:570704/1‑76 CCTGTGCCTGTGGATCCAGAACGATGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTG < 2:908318/76‑1 CTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGG < 1:857917/76‑1 TGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGC > 1:382610/1‑76 GTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCG > 2:611772/1‑76 GTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCG < 2:1581574/76‑1 GTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCG > 1:1029583/1‑76 TGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGT < 2:1437747/76‑1 GCCTGTGGATCCAGAGCGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < 2:378672/76‑1 GCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < 2:471369/76‑1 GCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG > 1:1216611/1‑76 CCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGATGCTGGCGTGC > 2:1279910/1‑76 CTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCC > 1:1737909/1‑76 TGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCAGGCGTGCCTTT < 2:722767/76‑1 GTCAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3014171‑3014087‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgtgcctgtgGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTT < REL606/3014080‑3014007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |