| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,014,094 | (ACAGGC)3→2 | coding (675‑680/1137 nt) | ECB_02815 → | Capsule polysaccharide export inner‑membrane protein kpsE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3014087 = | 1 (0.020) | 42 (0.900) | 33/124 | 0.3 | 97.9% | coding (668/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE |
| ? | REL606 | = 3014080 | 1 (0.020) | coding (661/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE | |||||
AAAGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAGCGGACC > REL606/3014007‑3014155 | aagggCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCca < 1:719585/73‑1 (MQ=255)aaaGGCACGCCTGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCca < 2:722767‑M2/76‑3 (MQ=255) ggCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacag > 1:1737909‑M2/1‑71 (MQ=255) gCACGCCAGCATCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacagg > 2:1279910‑M2/1‑70 (MQ=255) cACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggc < 2:471369‑M2/76‑8 (MQ=255) cACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggc > 1:1216611‑M2/1‑69 (MQ=255) cACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGCTCTGGATCcacaggc < 2:378672‑M2/76‑8 (MQ=255) aCGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggca < 2:1437747‑M2/76‑9 (MQ=255) cGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcac > 1:1029583‑M2/1‑67 (MQ=255) cGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcac < 2:1581574‑M2/76‑10 (MQ=255) cGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcac > 2:611772‑M2/1‑67 (MQ=255) gCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcaca > 1:382610‑M2/1‑66 (MQ=255) ccAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacag < 1:857917‑M2/76‑12 (MQ=255) cAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACATCGTTCTGGATCcacaggcacagg < 2:908318‑M2/76‑13 (MQ=255) cAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacagg > 2:570704‑M2/1‑64 (MQ=255) aGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggc > 1:1634135‑M2/1‑63 (MQ=255) gTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggc < 2:1433486‑M2/76‑17 (MQ=255) gTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggc < 1:891274‑M2/76‑17 (MQ=255) cTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcga < 1:280720‑M2/76‑19 (MQ=255) ggACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagc < 1:226854‑M2/76‑21 (MQ=255) ggACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagc < 1:468618‑M2/76‑21 (MQ=255) cGCCAGCAAAGCGGAATTGCCTTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCGCAGgcggcg < 2:1282350/76‑1 (MQ=255) ccAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgtt > 2:1161393‑M2/1‑51 (MQ=255) ccAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgtt > 2:1307981‑M2/1‑51 (MQ=255) aGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttag > 1:454946‑M2/1‑49 (MQ=255) cAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtg > 2:1516968‑M2/1‑47 (MQ=255) cAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtg > 1:1121710‑M2/1‑47 (MQ=255) aaaGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtga < 1:796880‑M2/76‑31 (MQ=255) aaaGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtga < 1:1057661‑M2/76‑31 (MQ=255) aaGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaa < 1:1536011‑M2/76‑32 (MQ=255) aGCGGAATTGCTCTCTTATCAAGACAACAACACCGTTCTGGATCcacaggcaccggcggcgagcacgttagtgaat > 2:917221‑M2/1‑44 (MQ=255) cGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatac < 2:276684‑M2/76‑35 (MQ=255) tGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgat > 1:774399‑M2/1‑36 (MQ=255) tctctTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatggg < 2:1259134‑M2/76‑44 (MQ=255) tctctTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatggg < 2:451329‑M2/76‑44 (MQ=255) ctTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggcca > 2:124844‑M2/1‑30 (MQ=255) ttATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccag < 1:1612994‑M2/76‑48 (MQ=255) tCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaag < 2:1160981‑M2/76‑51 (MQ=255) cAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaaga < 1:1335002‑M2/76‑52 (MQ=255) cAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaaga < 2:702933‑M2/76‑52 (MQ=255) cAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaaga < 2:297764‑M2/76‑52 (MQ=255) aaGACAACAACACCGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagat > 2:862282‑M2/1‑24 (MQ=255) aGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatc < 2:1436197‑M2/76‑54 (MQ=255) aGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatc > 1:441892‑M2/1‑23 (MQ=255) gACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatcc > 1:894699‑M2/1‑22 (MQ=255) acaacaacaACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatcca > 2:711382‑M2/1‑21 (MQ=255) acaacaacaACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatcca < 2:1304680‑M2/76‑56 (MQ=255) caacaacGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatg > 2:1664722‑M2/1‑17 (MQ=255) caacaacGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatg < 1:1258404‑M2/76‑60 (MQ=255) aacaacGTTCTGGATCcacaggcacaggcggcgagcacgttagggaatacgctgaggggccagaagatccagatgg < 1:1631159‑M2/76‑61 (MQ=255) acaacCTTCTGGAACcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatgga > 2:1027046‑M2/1‑15 (MQ=255) caacGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaa > 1:1287836‑M2/1‑14 (MQ=255) aacGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaag > 1:1566408‑M2/1‑13 (MQ=255) cGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcg > 1:1023694‑M2/1‑11 (MQ=255) ttCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcgga < 1:1769571‑M2/76‑68 (MQ=255) ttCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcgga < 2:936760‑M2/76‑68 (MQ=255) tGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcggacct < 2:1404986‑M2/76‑71 (MQ=255) ccacaggcacaggnggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcggacctgcgga < 1:1230951‑M2/76‑76 (MQ=255) ccacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcggacctgcgga > 1:1095111‑M2/1‑1 (MQ=255) | AAAGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAGCGGACC > REL606/3014007‑3014155 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |