| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 4,096,207 | Δ1,616 bp | [glpK]–glpF | [glpK], glpF | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 4096207 | 4097822 | 1616 | 67 [2] | [3] 71 | [glpK]–glpF | [glpK],glpF |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 4096206 | 2 (0.040) | 64 (1.150) | 50/148 | 0.1 | 96.3% | coding (499/1509 nt) | glpK | glycerol kinase |
| ? | REL606 | 4097823 = | 3 (0.050) | intergenic (‑251/‑175) | glpF/yiiU | glycerol facilitator/hypothetical protein | |||||
TGGTACGAGAGGCGTTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4096134‑4096206‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTCATA > REL606/4097823‑4097897 TGGTACGAGAGGCGTTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAG > 2:669607/1‑76 GGTACGAGAGGCGTTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGG < 1:850331/76‑1 GGTACGAGAGGCGTTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGG < 1:499305/76‑1 ACGAGAGGCGTTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGCGA > 1:196715/1‑76 ACGAGAGGCGTTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGA > 2:1158973/1‑76 CGAGAGGCGTTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAA < 2:1319341/76‑1 AGGCGTTGGTGTAATCGGTCACATGGACACGGCCCAGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGAT > 2:1655202/1‑76 GGCGTTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATG > 1:853625/1‑76 GGCGTTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATG < 1:44769/76‑1 CGTTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAA > 2:356597/1‑76 TTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAA > 2:887474/1‑76 TTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAA > 1:824344/1‑76 GTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTG > 2:404824/1‑76 TAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGG > 2:916877/1‑76 TAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGG > 2:1401128/1‑76 AATCGGTCACATGGACACGGCCCTGAGTCATTTTCCGGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGC > 2:863214/1‑76 AATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGC < 1:524541/76‑1 TCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAGGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAA > 1:464797/1‑76 TCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAA < 1:1287193/76‑1 GGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAAC < 2:576524/76‑1 TCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCG < 2:1400225/76‑1 TCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCG < 2:694841/76‑1 TGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATC < 2:674663/76‑1 CACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCA > 2:1189015/1‑76 CGGCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAG > 2:798612/1‑76 GCCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGC > 2:450797/1‑76 CCCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCG > 1:1195414/1‑76 CCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGT < 2:1349542/76‑1 CCTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGT > 2:1433790/1‑76 CTGTGTCTTTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTG < 2:885244/76‑1 CTGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTG < 2:815710/76‑1 TGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGC > 2:1728976/1‑76 TGAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGC > 1:1447059/1‑76 GAGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCC > 1:182010/1‑76 AGTCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCG > 2:536372/1‑76 TCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCT > 1:175409/1‑76 TCATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCT < 1:81780/76‑1 CATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTG > 1:1665863/1‑76 CATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTG < 1:1622578/76‑1 ATTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGG > 2:416763/1‑76 TTTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGA > 2:1379485/1‑76 TTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGAC < 1:1666755/76‑1 TTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGAC < 1:933961/76‑1 TTTCCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGAC > 1:343278/1‑76 CCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGC < 1:1063439/76‑1 CCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGC > 1:206197/1‑76 CCAGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGC < 1:872269/76‑1 AGATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGA > 2:839076/1‑76 ATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATG < 1:645311/76‑1 ATAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATG > 2:260313/1‑76 TAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGG > 2:1744779/1‑76 TAAGCCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGG > 1:1142867/1‑76 CCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGTACAGCGATGGCGCG > 2:1730909/1‑76 CCACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCG > 2:1113474/1‑76 CACGTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGG > 2:1032130/1‑76 CGTATCCAGGAGAAAGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGGGAGGGCGCGGCT > 1:982752/1‑76 GTATCCGGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTT < 2:524046/76‑1 GTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTT > 2:697381/1‑76 GTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTT < 2:598221/76‑1 GTATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTT < 2:1777610/76‑1 GTATCCAGGAGAAGGATGAAAAGAGTGGCAAACCGTAATCTGCAAGGCGTGGCGCTGGACAGCGATCGCGCGGCTT > 2:1208022/1‑76 TATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTC < 2:85966/76‑1 TATCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTC > 2:1310586/1‑76 TCCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTCAT < 1:321407/76‑1 CCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGGGGGGCTTCGTA > 2:614640/1‑76 TGGTACGAGAGGCGTTGGTGTAATCGGTCACATGGACACGGCCCTGAGTCATTTTCCAGATAAGCCACGTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4096134‑4096206‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTCATA > REL606/4097823‑4097897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |