| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 4,096,207 | Δ1,616 bp | [glpK]–glpF | [glpK], glpF | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 4096207 | 4097822 | 1616 | 67 [2] | [3] 71 | [glpK]–glpF | [glpK],glpF |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 4096206 | 2 (0.040) | 64 (1.150) | 50/148 | 0.1 | 96.3% | coding (499/1509 nt) | glpK | glycerol kinase |
| ? | REL606 | 4097823 = | 3 (0.050) | intergenic (‑251/‑175) | glpF/yiiU | glycerol facilitator/hypothetical protein | |||||
ACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTCATAC > REL606/4097750‑4097898 | tggtacgagaggcgttggtgtaatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAg > 2:669607‑M2/74‑76 (MQ=255)aCATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAg < 2:568760/76‑1 (MQ=255) ggtacgagaggcgttggtgtaatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAgg < 1:850331‑M2/4‑1 (MQ=255) ggtacgagaggcgttggtgtaatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAgg < 1:499305‑M2/4‑1 (MQ=255) acgagaggcgttggtgtaatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGgcga > 1:196715‑M2/70‑76 (MQ=255) acgagaggcgttggtgtaatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGgaga > 2:1158973‑M2/70‑76 (MQ=255) cgagaggcgttggtgtaatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGaa < 2:1319341‑M2/8‑1 (MQ=255) aggcgttggtgtaatcggtcacatggacacggcccagagtcattttccagataagccacgtatcCAGGAGAAGGAt > 2:1655202‑M2/65‑76 (MQ=255) ggcgttggtgtaatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATg > 1:853625‑M2/64‑76 (MQ=255) ggcgttggtgtaatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATg < 1:44769‑M2/13‑1 (MQ=255) gtttgttAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGa < 2:322130/76‑1 (MQ=255) cgttggtgtaatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGaa > 2:356597‑M2/62‑76 (MQ=255) ttggtgtaatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGaaaa > 2:887474‑M2/60‑76 (MQ=255) ttggtgtaatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGaaaa > 1:824344‑M2/60‑76 (MQ=255) gtaatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGtgtg > 2:404824‑M2/55‑76 (MQ=255) taatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTgg > 2:916877‑M2/54‑76 (MQ=255) taatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTgg > 2:1401128‑M2/54‑76 (MQ=255) aatcggtcacatggacacggccctgagtcattttccggataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGc > 2:863214‑M2/53‑76 (MQ=255) aatcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGc < 1:524541‑M2/24‑1 (MQ=255) tcggtcacatggacacggccctgagtcattttccagataggccacgtatcCAGGAGAAGGATGAAAAGTGTGGCaa > 1:464797‑M2/51‑76 (MQ=255) tcggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCaa < 1:1287193‑M2/26‑1 (MQ=255) ggtcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAAc < 2:576524‑M2/28‑1 (MQ=255) tcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCg < 2:694841‑M2/30‑1 (MQ=255) tcacatggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCg < 2:1400225‑M2/30‑1 (MQ=255) tggacacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATc < 2:674663‑M2/35‑1 (MQ=255) cacggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCa > 2:1189015‑M2/38‑76 (MQ=255) cggccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAg > 2:798612‑M2/36‑76 (MQ=255) gccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGc > 2:450797‑M2/34‑76 (MQ=255) ccctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCg > 1:1195414‑M2/33‑76 (MQ=255) cctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGt > 2:1433790‑M2/32‑76 (MQ=255) cctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGt < 2:1349542‑M2/45‑1 (MQ=255) ctgtgtctttttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTg < 2:885244‑M2/46‑1 (MQ=255) ctgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTg < 2:815710‑M2/46‑1 (MQ=255) tgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGc > 1:1447059‑M2/30‑76 (MQ=255) tgagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGc > 2:1728976‑M2/30‑76 (MQ=255) gagtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGcc > 1:182010‑M2/29‑76 (MQ=255) agtcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCg > 2:536372‑M2/28‑76 (MQ=255) tcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCt > 1:175409‑M2/26‑76 (MQ=255) tcattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCt < 1:81780‑M2/51‑1 (MQ=255) cattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTg > 1:1665863‑M2/25‑76 (MQ=255) cattttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTg < 1:1622578‑M2/52‑1 (MQ=255) tCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGACAAACCGTAATCTGCAAGGCGTGCCGCTgg > 1:480557/1‑76 (MQ=255) attttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTgg > 2:416763‑M2/24‑76 (MQ=255) ttttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGa > 2:1379485‑M2/23‑76 (MQ=255) tttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGAc < 1:933961‑M2/55‑1 (MQ=255) tttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGAc > 1:343278‑M2/22‑76 (MQ=255) tttccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGAc < 1:1666755‑M2/55‑1 (MQ=255) ccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGc < 1:872269‑M2/58‑1 (MQ=255) ccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGc > 1:206197‑M2/19‑76 (MQ=255) ccagataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGc < 1:1063439‑M2/58‑1 (MQ=255) agataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGa > 2:839076‑M2/17‑76 (MQ=255) ataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATg < 1:645311‑M2/62‑1 (MQ=255) ataagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATg > 2:260313‑M2/15‑76 (MQ=255) taagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATgg > 2:1744779‑M2/14‑76 (MQ=255) taagccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATgg > 1:1142867‑M2/14‑76 (MQ=255) ccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGTACAGCGATGGcgcg > 2:1730909‑M2/10‑76 (MQ=255) ccacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGcgcg > 2:1113474‑M2/10‑76 (MQ=255) cacgtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCgg > 2:1032130‑M2/9‑76 (MQ=255) cgtatcCAGGAGAAAGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGGGAGGGCGCGGCt > 1:982752‑M2/7‑76 (MQ=255) gtatcCGGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCtt < 2:524046‑M2/71‑1 (MQ=255) gtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCtt < 2:598221‑M2/71‑1 (MQ=255) gtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCtt > 2:697381‑M2/6‑76 (MQ=255) gtatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCtt < 2:1777610‑M2/71‑1 (MQ=255) gtatcCAGGAGAAGGATGAAAAGAGTGGCAAACCGTAATCTGCAAGGCGTGGCGCTGGACAGCGATCGCGCGGCtt > 2:1208022‑M2/6‑76 (MQ=255) tatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTc < 2:85966‑M2/72‑1 (MQ=255) tatcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTc > 2:1310586‑M2/5‑76 (MQ=255) tcCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTCAt < 1:321407‑M2/74‑1 (MQ=255) cCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGGGGGGCTTCGTa > 2:614640‑M2/2‑76 (MQ=255) cAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTTATAc > 2:544542/1‑76 (MQ=255) cAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTCATAc > 2:1586884/1‑76 (MQ=255) cAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTCATAc > 2:258614/1‑76 (MQ=255) | ACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGACAGCGATGGCGCGGCTTCATAC > REL606/4097750‑4097898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |