| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3021153 = | 89 (1.420) | 3 (0.050) | 3/138 | 6.7 | 3.6% | coding (331/933 nt) | ECB_02820 | hypothetical protein |
| ? | REL606 | 3021584 = | 78 (1.360) | coding (1101/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTTGTTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTTTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3021233‑3021153‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcttATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATA > REL606/3021584‑3021658 CTTGTTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGT < 2:1687209/76‑1CTTGTTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGT > 2:47211/1‑76CTTGTTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGT < 1:815260/76‑1 TTGTTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTT > 1:1565984/1‑76 TTGTTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTT > 2:1638518/1‑76 TTGTTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTT > 2:1505621/1‑76 TTGTTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTT > 1:739760/1‑76 TGTTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTTT < 2:812991/76‑1 TGTTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTTT > 1:847264/1‑76 TGTTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTTT > 1:776926/1‑76 TTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTTTCT > 1:18815/1‑76 TCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTTTCTTATCTTCATACA < 2:574574/76‑1 CGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTTTCTTATCTTCATACACATAA < 2:787961/76‑1 GATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTTTCTTATCTTCATACACATAATT < 2:40512/76‑1 TTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGG > 2:1271095/1‑76 TTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGG < 2:1390710/76‑1 TTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGG > 1:1753249/1‑76 TTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGG < 1:1448510/76‑1 TCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGA < 2:61564/76‑1 TCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGA > 1:1957163/1‑76 TCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGA < 1:1636424/76‑1 TCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGA < 2:1714585/76‑1 CTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAA > 1:1725511/1‑76 TTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAAT > 2:1103683/1‑76 TTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAAT < 1:1135686/76‑1 TATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATA > 2:1509292/1‑76 TATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATA < 1:509917/76‑1 TATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATA > 1:411662/1‑76 TATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATA > 1:1537892/1‑76 TATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATA > 2:828509/1‑76 CTTGTTCTTTTCAGAATCCTACGGATTTTATCGGTCATCAAGGTTTAACTTTTGATTATAGCAATGGGTATTTAGTTTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3021233‑3021153‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcttATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATA > REL606/3021584‑3021658 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |