| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3021153 = | 89 (1.420) | 3 (0.050) | 3/138 | 6.7 | 3.6% | coding (331/933 nt) | ECB_02820 | hypothetical protein |
| ? | REL606 | 3021584 = | 78 (1.360) | coding (1101/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CATACGGAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAA > REL606/3021078‑3021225 | cataCGGAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCga > 1:1706944/1‑76 (MQ=255) ataCGGAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCgaa < 2:1785930/76‑1 (MQ=255) taCGGAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCgaag < 2:1281240/76‑1 (MQ=255) taCGGAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCgaag > 2:614643/1‑76 (MQ=255) aCGGAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCgaaga < 1:1634232/76‑1 (MQ=255) cGGAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCgaagaa < 2:1284440/76‑1 (MQ=255) cGGAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCgaagaa > 1:500442/1‑76 (MQ=255) cGGAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCgaagaa > 1:580157/1‑76 (MQ=255) ggAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGaaa > 1:1474667/1‑76 (MQ=255) aaaaCGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAAc > 1:1038918/2‑76 (MQ=255) aCGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTaa < 2:1808520/76‑1 (MQ=255) cGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTaaa < 1:1220316/76‑1 (MQ=255) gTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAGACTAAAt < 2:1734265/76‑1 (MQ=255) gTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAAt < 1:1695834/76‑1 (MQ=255) gTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAAt < 1:997520/76‑1 (MQ=255) gTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAAt < 2:1499658/76‑1 (MQ=255) ttGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATAc > 1:1846978/1‑76 (MQ=255) ttGCTGCTGATAGTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATAc < 1:942117/76‑1 (MQ=255) gctgctGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATAccc > 1:1192741/1‑76 (MQ=255) tgctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCAt > 1:1811616/1‑76 (MQ=255) tgctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCAt > 2:896957/1‑76 (MQ=255) ctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTg > 2:1041136/1‑76 (MQ=255) ctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTg > 2:1739780/1‑76 (MQ=255) ctgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTg > 2:1040869/1‑76 (MQ=255) tgATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGc < 1:623773/76‑1 (MQ=255) gATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCt > 1:1714268/1‑76 (MQ=255) atatTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCta > 2:501108/1‑76 (MQ=255) tatTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCtat > 1:1726850/1‑76 (MQ=255) atTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCtata < 2:451266/76‑1 (MQ=255) atTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCtata < 1:336334/76‑1 (MQ=255) atTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCtata < 1:780707/76‑1 (MQ=255) atTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCtata > 1:1730896/1‑76 (MQ=255) atTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCtata > 1:1651985/1‑76 (MQ=255) tttAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATaa > 1:1925026/1‑76 (MQ=255) tttAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATaa < 2:627610/76‑1 (MQ=255) tAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATc < 1:170034/76‑1 (MQ=255) tAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATc < 1:922564/76‑1 (MQ=255) aaaGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCa > 1:562274/1‑76 (MQ=255) aaaGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCa > 1:562281/1‑76 (MQ=255) aaaGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCa > 2:35087/1‑76 (MQ=255) aaGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCaa < 2:1444597/76‑1 (MQ=255) aaGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCaa < 1:1225292/76‑1 (MQ=255) aaGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCaa < 2:1365104/76‑1 (MQ=255) gTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCaaaa < 1:1774488/76‑1 (MQ=255) gCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGt < 2:313822/76‑1 (MQ=255) cGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGtt < 2:1088113/76‑1 (MQ=255) gTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAGCTAAATACCCATTGCTATAATCAAAAGTTa < 1:240298/76‑1 (MQ=255) gTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTa < 1:240323/76‑1 (MQ=255) gTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTa > 1:275443/1‑76 (MQ=255) tGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTaa < 1:353794/76‑1 (MQ=255) tGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTaa < 2:1972364/76‑1 (MQ=255) gATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTaaa < 1:1983139/76‑1 (MQ=255) gATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTaaa < 2:1408084/76‑1 (MQ=255) aTAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAAc < 1:914497/76‑1 (MQ=255) aTAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAAc > 2:315114/1‑76 (MQ=255) aTAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAAc > 2:1338504/1‑76 (MQ=255) aaaCCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCt > 2:819703/1‑76 (MQ=255) aaCCATCCCTTGTANCTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCtt > 1:1077515/1‑76 (MQ=255) aaCCATCCCTTGTANCTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCtt > 1:1077527/1‑76 (MQ=255) aTCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTtgatg < 2:599087/76‑1 (MQ=255) cccTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGAc > 1:680228/1‑76 (MQ=255) ccTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGAcc > 1:49266/1‑76 (MQ=255) cTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCg < 2:668347/76‑1 (MQ=255) cTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCg < 2:1002689/76‑1 (MQ=255) ttGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGa > 1:86586/1‑76 (MQ=255) tGTAACTAAATGCATCACCAGCCGAAGAAATTAAATACCCATTGCTATAATCAATAGTTAAACCTTGATGACCGAt > 1:997733/1‑76 (MQ=255) tGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGAt > 1:1376918/1‑76 (MQ=255) gTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATa > 1:1414905/1‑76 (MQ=255) gTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATa > 2:841031/1‑76 (MQ=255) aaCTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATaaa > 2:227032/1‑76 (MQ=255) aaCTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATaaa > 2:307729/1‑76 (MQ=255) aaCTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATaaa > 1:295666/1‑76 (MQ=255) aaCTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATaaa < 2:998735/76‑1 (MQ=255) tAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATc < 1:1766107/76‑1 (MQ=255) aaaTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATcc > 1:524644/1‑76 (MQ=255) aaaTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATcc > 1:524653/1‑76 (MQ=255) aaaTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATcc > 2:225136/1‑76 (MQ=255) aaaTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATcc > 2:1592367/1‑76 (MQ=255) aaTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCg < 1:685338/76‑1 (MQ=255) aaTGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCg > 2:819867/1‑76 (MQ=255) gCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAg > 2:422063/1‑76 (MQ=255) aTCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGa > 2:1286632/1‑76 (MQ=255) tCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGAt > 2:642737/1‑76 (MQ=255) tCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGAt < 2:1305406/76‑1 (MQ=255) cACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGAtt < 1:1952120/76‑1 (MQ=255) cACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGAtt > 2:1144463/1‑76 (MQ=255) aCCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTc > 1:823008/1‑76 (MQ=255) cAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTg > 2:1326134/1‑76 (MQ=255) ccGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGaaa > 2:31831/1‑76 (MQ=255) | CATACGGAAACGTTTGCTGCTGATATTTAAAGTGCGTGATAAACCATCCCTTGTAACTAAATGCATCACCAGCCGAAGAAACTAAATACCCATTGCTATAATCAAAAGTTAAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAA > REL606/3021078‑3021225 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |