| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 799063 | 87 (1.760) | 8 (0.180) | 5/132 | 4.5 | 10.1% | coding (213/1146 nt) | ECB_00739 | hypothetical protein |
| ? | REL606 | = 799605 | 66 (1.520) | intergenic (‑330/+454) | ECB_00739/ybhB | hypothetical protein/predicted kinase inhibitor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGAAATTGAGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/798980‑799063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attgagaatTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTATCTTT < REL606/799605‑799531 AGAAATTGAGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAA > 2:882388/1‑76AGAAATTGAGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAA > 2:642814/1‑76AGAAATTGAGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAA > 1:653754/1‑76AGAAATTGAGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAA > 1:996141/1‑76 AAATTGAGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATT > 2:1060222/1‑76 AATTGAGTGTTTATTATGTAATACATGCAACAGCGTGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTG < 1:30938/76‑1 TGAGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGA < 1:990009/76‑1 TGAGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAACTGAGA > 1:1469299/1‑76 GAGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAA > 1:1380612/1‑76 AGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAAT < 2:899742/76‑1 TGGGGATATTCTAAATATTCTTCTAATTGAGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAA > 2:1336641/1‑76 ATATTCTAAATATTCTTCTAATTGAGAATTAGCAACAGTTTTATTTTGCGTATCATCAATTCAGAATACAGAGACA > 2:1579935/1‑76 ATATTCTAAATATTCTTCTAATTGAGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGCATACACAGTCA > 2:1579955/1‑76 TATTCTAAATATTCTTCTAATTGAGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCAC > 2:1070773/1‑76 TATTCTAAATATTCTTCTAATTGAGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCAC > 2:1070757/1‑76 TATTCTTCTAATTGAGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATG > 2:592436/1‑76 TATTCTTCTAATTGAGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATG > 2:592446/1‑76 TCTTCTAATTGAGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATGTTC > 2:1316688/1‑76 ATTGAGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTG > 1:1329379/1‑76 ATTGAGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTG > 1:654929/1‑76 TTGAGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGG > 1:319956/1‑76 TGAGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGT < 2:204878/76‑1 TGAGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGT > 2:377552/1‑76 AGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTAT > 2:139138/1‑76 AGAATTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTAT < 1:1355327/76‑1 TTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTATCTTT > 1:615571/1‑76 AGAAATTGAGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/798980‑799063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attgagaatTAGCAAAAGTTTTATTTTGCGTATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTATCTTT < REL606/799605‑799531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |