| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 799063 | 87 (1.760) | 8 (0.180) | 5/132 | 4.5 | 10.1% | coding (213/1146 nt) | ECB_00739 | hypothetical protein |
| ? | REL606 | = 799605 | 66 (1.520) | intergenic (‑330/+454) | ECB_00739/ybhB | hypothetical protein/predicted kinase inhibitor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAATATATCA > REL606/798988‑799138 | aGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATtgagaat < 2:899742/76‑1 (MQ=255) gtTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATtgagaatgag > 2:23200/1‑76 (MQ=255) gtTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATtgagaatgag > 1:1133297/1‑76 (MQ=255) tttATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATtgagaatgaga > 1:24982/1‑76 (MQ=255) tttATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATtgagaatgaga > 1:1566089/1‑76 (MQ=255) tttATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATtgagaatgaga < 1:1444521/76‑1 (MQ=255) ttattaTGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATtgagaatgagaa > 2:672270/1‑76 (MQ=255) tattatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGaaa > 2:926109/1‑76 (MQ=255) tattatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGaaa < 2:914004/76‑1 (MQ=255) attatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAg > 2:962266/1‑76 (MQ=255) attatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAg > 2:776630/1‑76 (MQ=255) ttatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGt < 2:40238/76‑1 (MQ=255) tatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTa < 2:1163261/76‑1 (MQ=255) atGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTAt < 2:1445957/76‑1 (MQ=255) atGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTAt > 2:1000032/1‑76 (MQ=255) tGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATc > 2:1286053/1‑76 (MQ=255) gTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCa > 1:919760/1‑76 (MQ=255) tAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCAt > 2:1298882/1‑76 (MQ=255) tAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCAt > 2:324416/1‑76 (MQ=255) aaTACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCAtt > 2:1304402/1‑76 (MQ=255) tACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTaa > 1:1499293/1‑76 (MQ=255) aCATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAAc < 1:1301405/76‑1 (MQ=255) aTGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAActt > 2:150765/1‑76 (MQ=255) gCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAActtcc > 1:642892/1‑76 (MQ=255) gCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAActtcc > 1:642870/1‑76 (MQ=255) gCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAActtcc > 1:642866/1‑76 (MQ=255) cAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCcttct < 1:1597205/76‑1 (MQ=255) cAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCcttct < 2:1455343/76‑1 (MQ=255) cAGCATGTGATTAGTAATGGGTAAATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCcttct > 2:1565716/1‑76 (MQ=255) gCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCttcttt < 2:579297/76‑1 (MQ=255) gCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCttcttt > 2:418141/1‑76 (MQ=255) aTGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCttctttct < 1:514162/76‑1 (MQ=255) aTGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCttctttct > 1:726709/1‑76 (MQ=255) gtgATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCttg < 1:1237208/76‑1 (MQ=255) tgATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCttgt > 2:1061865/1‑76 (MQ=255) gATTAGTAATGGGTATATTCTGAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTtctttcttaaa < 2:896852/76‑4 (MQ=255) gATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCttgtt > 2:1573116/1‑76 (MQ=255) ttAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGa > 2:1282700/1‑76 (MQ=255) ttAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGa > 1:340686/1‑76 (MQ=255) aGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGt > 2:882003/1‑76 (MQ=255) aGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGt < 1:232040/76‑1 (MQ=255) aGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTATCTTGTTGAGt < 2:1521494/76‑1 (MQ=255) tAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGtat < 2:1415549/76‑1 (MQ=255) tAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGtat < 2:1369344/76‑1 (MQ=255) aaTGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGtata < 2:1301049/76‑1 (MQ=255) aTGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATAc < 2:66499/76‑1 (MQ=255) tGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACg > 1:1336641/1‑76 (MQ=255) gggTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACga > 1:757816/1‑76 (MQ=255) ggTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgat > 1:119337/1‑76 (MQ=255) gTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgatg > 1:988144/1‑76 (MQ=255) gTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgatg > 1:404120/1‑76 (MQ=255) tataTTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgatga > 2:76261/1‑76 (MQ=255) atatTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCCTTAACTTCCTTCTTTCTTGTTGAGTATACgatgat > 1:1579955/1‑76 (MQ=255) atatTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgatgat > 1:1579935/1‑76 (MQ=255) atatTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgatgat > 1:335801/1‑76 (MQ=255) atatTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgatgat > 2:1315129/1‑76 (MQ=255) tatTCTAAATATTNTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATa > 1:1078041/1‑76 (MQ=255) tatTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATa > 1:417276/1‑76 (MQ=255) tatTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATa > 1:1070757/1‑76 (MQ=255) tatTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATa > 1:1070773/1‑76 (MQ=255) atTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATaa < 1:274614/76‑1 (MQ=255) ttCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATaaa > 2:1379020/1‑76 (MQ=255) cTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATc < 1:604440/76‑1 (MQ=255) cTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATc > 2:182621/1‑76 (MQ=255) cTAAATATTCGTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATc < 2:1111758/76‑1 (MQ=255) tAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATcc > 2:1012795/1‑76 (MQ=255) tAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATcc < 1:1015400/76‑1 (MQ=255) aaaTATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATGCGATGATAAATCCa < 1:855007/76‑1 (MQ=255) aaaTATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCa > 1:319546/1‑76 (MQ=255) aaTATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCAc > 2:142468/1‑76 (MQ=255) tatTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACtt > 1:592436/1‑76 (MQ=255) tatTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACtt > 1:592446/1‑76 (MQ=255) tcttctAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAat > 1:1316688/1‑76 (MQ=255) cttctAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAata < 1:286747/76‑1 (MQ=255) ttctAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAatat > 1:213635/1‑76 (MQ=255) ttctAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAatat > 2:535209/1‑76 (MQ=255) tctAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATg > 1:391598/1‑76 (MQ=255) ctAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATga > 1:100705/1‑76 (MQ=255) aaTTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATgaag > 1:119825/1‑76 (MQ=255) tgagaatgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAat > 2:394008/1‑76 (MQ=255) tgagaatgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAat > 2:1122919/1‑76 (MQ=255) tgagaatgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAat < 1:827674/76‑1 (MQ=255) tgagaatgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAat < 1:827663/76‑1 (MQ=255) tgagaatgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAat < 1:474537/76‑1 (MQ=255) agaatgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTCATATGAAGAatat < 1:1060222/76‑1 (MQ=255) gaatgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCGCTTAATATGAAGAatata < 1:139220/76‑1 (MQ=255) tgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAGTATATCa < 1:1002888/76‑1 (MQ=255) tgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAATATATCa > 1:799833/1‑76 (MQ=255) | AGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAATATATCA > REL606/798988‑799138 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |