| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3021800 = | 90 (1.820) | 8 (0.170) | 7/142 | 4.0 | 8.0% | coding (885/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | 3022259 = | 100 (2.140) | coding (426/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TATCGGCGTTTCATTTGCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3021878‑3021800‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtaCTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCT > REL606/3022259‑3022333 TATCGGCGTTGCATTTGCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGC < 2:1106506/76‑1 ATCGGCGTTTCATTTGCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCG > 1:484964/1‑76 ATCGGCGTTTCATTTGCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCG > 1:502194/1‑76 TCGGCGTTTCATTTGCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGT > 1:10284/1‑76 TCGGCGTTTCATTTGCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGT > 1:214100/1‑76 TCGGCGTTTCATTTGCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGT > 1:688335/1‑76 TCGGCGTTTCATTTGCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGT > 1:10272/1‑76 CGGCGTTTCATTTGCAATTACTGATATTTCTGCTATGGGGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGTA > 1:667345/1‑76 CGTTTCATTTGCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGTACTG < 2:1522106/76‑1 CGTTTCATTTGCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGTACTG < 2:1522094/76‑1 TGCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGTACTGAGTGAATAT < 2:879548/76‑1 GCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGTACTGAGTGAATATA < 2:141648/76‑1 CAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGTAGTGAGTGAATATAC < 2:63790/76‑1 TGATATTTCTGCTAGGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGTACTGAGTGAATATACCTGATTT < 2:54368/76‑1 TTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGTAGTGAGTGAATATACCTGATTTCAAATA < 2:719584/76‑1 TCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGTACCGAGTCAATATACCTGATTTCAAATAT < 2:334457/76‑1 CGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGAT > 2:1500134/1‑76 CGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGAT < 1:1331636/76‑1 CGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGAT > 2:938537/1‑76 GTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGtgc < 2:775969/76‑4 TACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTC > 1:352186/1‑76 ACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCT > 1:391470/1‑76 TATCGGCGTTTCATTTGCAATTACTGATATTTCTGCTATGGAGGTACAGTTTCACTCTCGAAGAATTCCATGTAGCGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3021878‑3021800‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtaCTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCT > REL606/3022259‑3022333 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |