| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3021800 = | 90 (1.820) | 8 (0.170) | 7/142 | 4.0 | 8.0% | coding (885/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | 3022259 = | 100 (2.140) | coding (426/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGAAACGCCG > REL606/3021732‑3021875 | atatTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTAc > 2:350769/1‑76 (MQ=255) tatTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACa > 2:1454971/1‑76 (MQ=255) ttCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATg < 2:624241/76‑1 (MQ=255) tataAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAAt > 2:1162113/1‑76 (MQ=255) tataAAACGGCAGCATTCTTTTGGGGATATGTAGTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAAt < 1:13857/76‑1 (MQ=255) ataAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAAtt < 1:174268/76‑1 (MQ=255) aaCGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAAttcttc > 2:468851/1‑76 (MQ=255) aaCGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAAttcttc < 2:860463/76‑1 (MQ=255) aCGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCg < 1:1576080/76‑1 (MQ=255) cagcaTTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGagag > 1:1034484/1‑76 (MQ=255) agcaTTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGt > 1:126633/1‑76 (MQ=255) agcaTTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGt < 1:1564672/76‑1 (MQ=255) agcaTTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGt < 2:430352/76‑1 (MQ=255) gcaTTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTg < 1:1091976/76‑1 (MQ=255) gcaTTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTg < 1:1091965/76‑1 (MQ=255) caTTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGa < 2:733694/76‑1 (MQ=255) aTTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGaa > 1:1169973/1‑76 (MQ=255) ttCGTTGGGGGAGATGTATTCGTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGaaa < 1:1383195/76‑1 (MQ=255) tCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAAc > 1:1183325/1‑76 (MQ=255) tCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAAc > 2:787301/1‑76 (MQ=255) tCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAAc < 1:975341/76‑1 (MQ=255) tttGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGt < 1:1062052/76‑1 (MQ=255) tttGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGt > 1:1104961/1‑76 (MQ=255) ttGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTa < 2:855196/76‑1 (MQ=255) ggggTTATGTATTCTTTGCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTAcc < 1:1268531/76‑1 (MQ=255) gggATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCt < 1:383708/76‑1 (MQ=255) ggATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTc < 2:1388313/76‑1 (MQ=255) atatGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCa < 2:1472778/76‑1 (MQ=255) tatGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCAt < 2:1160950/76‑1 (MQ=255) atGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATa < 1:65755/76‑1 (MQ=255) atGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATa < 2:560712/76‑1 (MQ=255) atGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACACGGAATTCTTCGAGAGTGAAACTGTACCTCCATa > 1:1239598/1‑76 (MQ=255) tGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAg < 1:350769/76‑1 (MQ=255) gTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGc < 1:391123/76‑1 (MQ=255) tATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCa > 1:445873/1‑76 (MQ=255) tATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCa < 1:696069/76‑1 (MQ=255) tATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCa > 1:1281951/1‑76 (MQ=255) tATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCa > 1:1281957/1‑76 (MQ=255) tATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCa > 1:1281967/1‑76 (MQ=255) tATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCa < 2:1120903/76‑1 (MQ=255) aTTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAg > 2:813447/1‑76 (MQ=255) aTTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAg < 2:845956/76‑1 (MQ=255) aTTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAg > 1:899137/1‑76 (MQ=255) ttCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGa > 2:91495/1‑76 (MQ=255) cTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGaaa < 1:1251518/76‑1 (MQ=255) tttCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAat < 1:658836/76‑1 (MQ=255) tttCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAat < 2:265186/76‑1 (MQ=255) ttCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAata > 1:585855/1‑76 (MQ=255) tCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATCGCAGAAatat > 1:304114/1‑76 (MQ=255) ccGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATc < 1:1389619/76‑1 (MQ=255) ccGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATc < 1:1389634/76‑1 (MQ=255) ccGCCTTGTTTTCTTTTAGCACCACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATc > 1:186971/1‑76 (MQ=255) cGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCa > 2:230288/1‑76 (MQ=255) gCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAg > 2:1518941/1‑76 (MQ=255) ccTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGt > 1:1397413/1‑76 (MQ=255) ccTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGt > 1:377565/1‑76 (MQ=255) ccTTGTTTTCTTTTAGCACTACGCTACATGGAATGCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGt < 1:376048/76‑1 (MQ=255) cTTGTTTTCTTTTAGCACCACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTa > 1:1558063/1‑76 (MQ=255) ttGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTaa > 1:660574/1‑76 (MQ=255) ttGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTaa < 1:370406/76‑1 (MQ=255) tGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAAt > 1:310783/1‑76 (MQ=255) gTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAAtt > 1:24256/1‑76 (MQ=255) gTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAAtt < 2:1090562/76‑1 (MQ=255) gTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAAtt > 2:971812/1‑76 (MQ=255) ttttCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTg > 1:692873/1‑76 (MQ=255) ttttCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTg < 2:225267/76‑1 (MQ=255) ttttCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTg > 2:1565812/1‑76 (MQ=255) ttttCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTg > 1:1045494/1‑76 (MQ=255) tCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCaa > 1:1000130/1‑76 (MQ=255) cTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCaaa > 1:905666/1‑76 (MQ=255) cTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCaaa < 1:142975/76‑1 (MQ=255) ttttAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAAt > 1:1376400/1‑76 (MQ=255) tttAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATg < 2:1109698/76‑1 (MQ=255) ttAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGa > 2:380642/1‑76 (MQ=255) ttAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGa < 1:1185865/76‑1 (MQ=255) ttAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGa < 1:756210/76‑1 (MQ=255) ttAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGa < 1:357525/76‑1 (MQ=255) tAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGaa > 2:974177/1‑76 (MQ=255) tAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGaa < 1:974177/76‑1 (MQ=255) tAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGaa < 1:1504204/76‑1 (MQ=255) tAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGaa > 1:1014291/1‑76 (MQ=255) tAGCACTACGCTACACGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGaa < 1:214652/76‑1 (MQ=255) aGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGaaa > 1:164089/1‑76 (MQ=255) gCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTTATTGCAAATGAAAc < 1:858341/76‑1 (MQ=255) gCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTGATTGCAAATGAAAc < 1:858359/76‑1 (MQ=255) gCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGAAAc > 1:775969/1‑76 (MQ=255) gCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGAAAc < 1:537418/76‑1 (MQ=255) cagtACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGAAACg > 2:1522106/4‑76 (MQ=255) cagtACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGAAACg > 2:1522094/4‑76 (MQ=255) cACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAATTGAAACg < 1:1001594/76‑1 (MQ=255) cACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAATTGAAACg < 1:1001577/76‑1 (MQ=255) cACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGAAACg < 1:1190714/76‑1 (MQ=255) tACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCCCCATAGCAGAAATATCAGTAATTGCAAATGAAACGCCg < 1:667345/76‑1 (MQ=255) | ATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATGGAATTCTTCGAGAGTGAAACTGTACCTCCATAGCAGAAATATCAGTAATTGCAAATGAAACGCCG > REL606/3021732‑3021875 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |