Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | REL606 | 2,298,759 | Δ4 bp | coding (321‑324/1359 nt) | glpT ← | sn‑glycerol‑3‑phosphate transporter |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 2298759 | 2298762 | 4 | 13 [0] | [0] 13 | glpT | sn‑glycerol‑3‑phosphate transporter |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2298758 | 0 (0.000) | 13 (0.590) | 11/150 | 0.9 | 100% | coding (325/1359 nt) | glpT | sn‑glycerol‑3‑phosphate transporter |
? | REL606 | 2298763 = | 0 (0.000) | coding (320/1359 nt) | glpT | sn‑glycerol‑3‑phosphate transporter |
AACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2298689‑2298758 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCC > REL606/2298763‑2298834 AACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGCCGCCCATGGCACAAAGCCCATAAAATCACT > 2:499326/1‑76 GCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAAATCACTGCCG < 2:344375/76‑1 ACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAAATCACTGCCGCCGCCAGA > 2:324768/1‑76 CAACAGTACAAACATCACCGCAATGCTCGACGTCTCCCATGGCACAAAGCCCATAAAATCACTGCCGCCGCCAGAA < 2:368750/76‑1 TACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAAATCACTGCCGCCGCCAGAATCAAAC > 2:244760/1‑76 CAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAAATCACTGCCGCCGCCAGAATCAAACCT > 2:564491/1‑76 TCGACGTCGCCCATGGCACAAAGCCCATAAAATCACTGCCGCCGCCAGAAGCAAACCTGCGGGCAGGAAAACGCtc > 2:485765/1‑74 CGACGTCGCCCATGGCACAAAGCCCATAAAATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCG > 2:63711/1‑76 CGCCCATGGCACAAAGCCCATAAAATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGCTTCG > 1:73712/1‑76 CGCCCATGGCACAAAGCCCATAAAATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCG > 2:136968/1‑76 gTGGCACAAAGCCCATAAAATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGA > 1:397034/2‑76 CCCATAAAATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACGGA > 1:545007/1‑76 TAAAATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCC > 1:597873/1‑76 AACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2298689‑2298758 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCC > REL606/2298763‑2298834 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |