Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 2,614,614 | Δ3 bp | coding (681‑683/849 nt) | focB → | putative formate transporter |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 2614614 | 2614616 | 3 | 47 [0] | [0] 43 | focB | putative formate transporter |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2614613 | 0 (0.000) | 43 (1.100) | 34/234 | 0.2 | 100% | coding (680/849 nt) | focB | putative formate transporter |
? | NC_000913 | 2614617 = | 0 (0.000) | coding (684/849 nt) | focB | putative formate transporter |
GCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTAT > NC_000913/2614481‑2614752 | attgcgggcgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccccc > 1:63282‑M2/137‑139 (MQ=255) ggcgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTg > 1:50613‑M2/131‑139 (MQ=255) tcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGc < 2:50613‑M2/14‑1 (MQ=255) tcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGc < 2:203397‑M2/14‑1 (MQ=255) tcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGc < 1:75886‑M2/14‑1 (MQ=255) gttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccatccgccatttcgccccCCCCTTCTGGCAGCTg < 1:79423‑M2/16‑1 (MQ=255) gcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGca < 2:708043‑M2/21‑1 (MQ=255) acaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAg > 2:328298‑M2/116‑139 (MQ=255) acaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAg > 1:340229‑M2/116‑139 (MQ=255) aaaatcgtcgccatgattttgcccatcaccctgtttgtcgtcagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTa > 1:684680‑M2/114‑139 (MQ=255) ttttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTcc < 2:726480‑M2/42‑1 (MQ=255) cccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgtcattgccattcgccatttcgcccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCa > 2:500213‑M2/94‑139 (MQ=255) tcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGAc > 2:731758‑M2/89‑139 (MQ=255) caccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACg > 1:209782‑M2/88‑139 (MQ=255) gtttgtcgtcagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 2:684680‑M2/58‑1 (MQ=255) gtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 1:302010‑M2/58‑1 (MQ=255) gtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 1:125064‑M2/58‑1 (MQ=255) gtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCAtt < 1:557411‑M2/62‑1 (MQ=255) gccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 1:748020‑M2/58‑1 (MQ=255) gccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc > 2:748020‑M2/75‑132 (MQ=255) gtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgcccccccc > 2:445652‑M2/71‑74 (MQ=255) gtggctttgagcactgtatcgccaatttgtttgggattccgttcgccattgccattcgccatttcgcccccccc < 1:445652‑M2/4‑1 (MQ=255) tgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAAt < 2:717680‑M2/76‑1 (MQ=255) actgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCt < 2:335318‑M2/81‑1 (MQ=255) tgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCt > 1:667814‑M2/57‑134 (MQ=255) tgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCt < 2:667814‑M2/78‑1 (MQ=255) gtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTccc > 2:445446‑M2/56‑139 (MQ=255) tatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCg > 2:139338‑M2/55‑139 (MQ=255) ccaatttgtttgtgattccgttcgccattgccattcgccaattcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGAt > 2:234783‑M2/50‑139 (MQ=255) caatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg < 1:445446‑M2/91‑1 (MQ=255) caatttgtttgtgattccgttagccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCACAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg < 2:469927‑M2/91‑1 (MQ=255) atttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCt < 2:594272‑M2/93‑1 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTgg > 1:117227‑M2/45‑139 (MQ=255) cgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATcgg < 1:731758‑M2/108‑1 (MQ=255) ttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATgctgggtaatatcggcggtg > 2:780299‑M2/30‑131 (MQ=255) gccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCTTTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtg < 2:124600‑M2/113‑1 (MQ=255) attgccattcgccatttcgcccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCggcggtgcc < 1:500213‑M2/115‑2 (MQ=255) tgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGcggtgcggtg < 1:354004‑M2/118‑1 (MQ=255) cattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTg < 1:328298‑M2/121‑1 (MQ=255) attcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTgg < 1:139338‑M2/122‑1 (MQ=255) cgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGa > 2:500297‑M2/15‑139 (MQ=255) cccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTAt < 2:326701‑M2/136‑1 (MQ=255) cccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTAt < 1:500297‑M2/136‑1 (MQ=255) | GCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTAT > NC_000913/2614481‑2614752 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |