Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 2,893,961 | Δ3 bp | coding (43‑45/261 nt) | ygcO → | putative 4Fe‑4S cluster‑containing protein |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 2893961 | 2893963 | 3 | 47 [0] | [0] 47 | ygcO | putative 4Fe‑4S cluster‑containing protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2893960 | 0 (0.000) | 47 (1.190) | 34/238 | 0.2 | 100% | coding (42/261 nt) | ygcO | putative 4Fe‑4S cluster‑containing protein |
? | NC_000913 | 2893964 = | 0 (0.000) | coding (46/261 nt) | ygcO | putative 4Fe‑4S cluster‑containing protein |
TAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCC > NC_000913/2893826‑2894099 | tgataaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccga < 1:455490‑M2/1‑1 (MQ=255) ataaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgAtt > 2:774914‑M2/137‑139 (MQ=255) taaacctgttccaccgctgcgccagttattctggcatcatttgcgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTg > 2:523005‑M2/136‑139 (MQ=255) taaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTg > 2:490187‑M2/136‑139 (MQ=255) gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGc > 2:200637‑M2/129‑139 (MQ=255) gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGc > 1:631573‑M2/129‑139 (MQ=255) gcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTg > 1:154056‑M2/118‑139 (MQ=255) gccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAg < 1:139365‑M2/24‑1 (MQ=255) gttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGcc > 1:799522‑M2/112‑139 (MQ=255) tctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACg > 2:182627‑M2/107‑139 (MQ=255) catcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGa > 1:504723‑M2/102‑139 (MQ=255) atcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGaa < 1:503746‑M2/39‑1 (MQ=255) atttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACgg > 2:136588‑M2/98‑139 (MQ=255) tttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt > 2:52241‑M2/97‑139 (MQ=255) tttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt > 2:165579‑M2/97‑139 (MQ=255) gtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgcggttgcgacgATTGTTCCGGCTGATTACCTTGAGCGCCAGACGGCAGCACGGTTGATTAAc < 1:97457‑M2/51‑1 (MQ=255) tggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccggaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGc < 1:526456‑M2/62‑1 (MQ=255) ctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCt > 2:485636‑M2/72‑139 (MQ=255) gcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCg < 1:485636‑M2/75‑1 (MQ=255) tatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCacac < 1:200637‑M2/82‑1 (MQ=255) caggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCgg < 2:504723‑M2/85‑1 (MQ=255) gagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAg < 1:69219‑M2/88‑1 (MQ=255) agtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACgg < 1:134313‑M2/42‑1 (MQ=255) agtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACgg > 2:134313‑M2/51‑92 (MQ=255) agtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCgg < 1:746488‑M2/85‑1 (MQ=255) agtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCgg > 2:746488‑M2/51‑135 (MQ=255) agtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAgg > 1:540546‑M2/51‑139 (MQ=255) gtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt < 1:165579‑M2/90‑1 (MQ=255) gtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt < 2:398098‑M2/90‑1 (MQ=255) gtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt < 1:490187‑M2/90‑1 (MQ=255) tgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAAc > 1:252300‑M2/47‑139 (MQ=255) tgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAAc > 2:644869‑M2/47‑139 (MQ=255) tgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt < 1:702277‑M2/90‑1 (MQ=255) tgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt > 2:702277‑M2/38‑127 (MQ=255) gtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCg < 1:590174‑M2/110‑1 (MQ=255) gtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCg > 2:302992‑M2/30‑139 (MQ=255) aatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa < 1:440567‑M2/112‑1 (MQ=255) aatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa < 2:729319‑M2/112‑1 (MQ=255) aatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa < 2:219284‑M2/112‑1 (MQ=255) gcgcgttgctgatgcgccgATTGTTCCGGCTGACTGCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTg < 1:720572‑M2/120‑1 (MQ=255) cgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAg > 2:647128‑M2/17‑139 (MQ=255) ttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAgtg > 1:312247‑M2/15‑139 (MQ=255) tgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt < 1:389087‑M2/90‑1 (MQ=255) tgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt > 2:389087‑M2/14‑103 (MQ=255) gatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCa > 2:341254‑M2/10‑139 (MQ=255) atgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTCTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCAc < 1:52241‑M2/131‑1 (MQ=255) ccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGcc > 1:686788‑M2/4‑139 (MQ=255) | TAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCC > NC_000913/2893826‑2894099 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |