Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,893,961 Δ3 bp coding (43‑45/261 nt) ygcO → putative 4Fe‑4S cluster‑containing protein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2893961 2893963 3 47 [0] [0] 47 ygcO putative 4Fe‑4S cluster‑containing protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 28939600 (0.000)47 (1.190) 34/238 0.2 100% coding (42/261 nt) ygcO putative 4Fe‑4S cluster‑containing protein
?NC_000913 2893964 = 0 (0.000)coding (46/261 nt) ygcO putative 4Fe‑4S cluster‑containing protein

TAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCC  >  NC_000913/2893826‑2894099
                                                                                                                                          |                                                                                                                                       
tgataaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccga                                                                                                                                         <  1:455490‑M2/1‑1 (MQ=255)
  ataaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgAtt                                                                                                                                       >  2:774914‑M2/137‑139 (MQ=255)
   taaacctgttccaccgctgcgccagttattctggcatcatttgcgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTg                                                                                                                                      >  2:523005‑M2/136‑139 (MQ=255)
   taaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTg                                                                                                                                      >  2:490187‑M2/136‑139 (MQ=255)
          gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGc                                                                                                                               >  2:200637‑M2/129‑139 (MQ=255)
          gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGc                                                                                                                               >  1:631573‑M2/129‑139 (MQ=255)
                     gcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTg                                                                                                                    >  1:154056‑M2/118‑139 (MQ=255)
                       gccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAg                                                                                                                  <  1:139365‑M2/24‑1 (MQ=255)
                           gttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGcc                                                                                                              >  1:799522‑M2/112‑139 (MQ=255)
                                tctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACg                                                                                                         >  2:182627‑M2/107‑139 (MQ=255)
                                     catcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGa                                                                                                    >  1:504723‑M2/102‑139 (MQ=255)
                                      atcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGaa                                                                                                   <  1:503746‑M2/39‑1 (MQ=255)
                                         atttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACgg                                                                                                >  2:136588‑M2/98‑139 (MQ=255)
                                          tttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt                                                                                               >  2:52241‑M2/97‑139 (MQ=255)
                                          tttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt                                                                                               >  2:165579‑M2/97‑139 (MQ=255)
                                                  gtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgcggttgcgacgATTGTTCCGGCTGATTACCTTGAGCGCCAGACGGCAGCACGGTTGATTAAc                                                                                       <  1:97457‑M2/51‑1 (MQ=255)
                                                             tggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccggaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGc                                                                            <  1:526456‑M2/62‑1 (MQ=255)
                                                                   ctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCt                                                                      >  2:485636‑M2/72‑139 (MQ=255)
                                                                          gcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCg                                                               <  1:485636‑M2/75‑1 (MQ=255)
                                                                                 tatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCacac                                                        <  1:200637‑M2/82‑1 (MQ=255)
                                                                                    caggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCgg                                                     <  2:504723‑M2/85‑1 (MQ=255)
                                                                                       gagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAg                                                  <  1:69219‑M2/88‑1 (MQ=255)
                                                                                        agtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACgg                                                                                                <  1:134313‑M2/42‑1 (MQ=255)
                                                                                        agtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACgg                                                                                                >  2:134313‑M2/51‑92 (MQ=255)
                                                                                        agtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCgg                                                     <  1:746488‑M2/85‑1 (MQ=255)
                                                                                        agtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCgg                                                     >  2:746488‑M2/51‑135 (MQ=255)
                                                                                        agtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAgg                                                 >  1:540546‑M2/51‑139 (MQ=255)
                                                                                         gtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                <  1:165579‑M2/90‑1 (MQ=255)
                                                                                         gtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                <  2:398098‑M2/90‑1 (MQ=255)
                                                                                         gtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                <  1:490187‑M2/90‑1 (MQ=255)
                                                                                            tgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAAc                                             >  1:252300‑M2/47‑139 (MQ=255)
                                                                                            tgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAAc                                             >  2:644869‑M2/47‑139 (MQ=255)
                                                                                                     tgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                <  1:702277‑M2/90‑1 (MQ=255)
                                                                                                     tgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                >  2:702277‑M2/38‑127 (MQ=255)
                                                                                                             gtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCg                            <  1:590174‑M2/110‑1 (MQ=255)
                                                                                                             gtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCg                            >  2:302992‑M2/30‑139 (MQ=255)
                                                                                                               aatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                          <  1:440567‑M2/112‑1 (MQ=255)
                                                                                                               aatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                          <  2:729319‑M2/112‑1 (MQ=255)
                                                                                                               aatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                          <  2:219284‑M2/112‑1 (MQ=255)
                                                                                                                       gcgcgttgctgatgcgccgATTGTTCCGGCTGACTGCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTg                  <  1:720572‑M2/120‑1 (MQ=255)
                                                                                                                          cgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAg               >  2:647128‑M2/17‑139 (MQ=255)
                                                                                                                            ttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAgtg             >  1:312247‑M2/15‑139 (MQ=255)
                                                                                                                             tgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                <  1:389087‑M2/90‑1 (MQ=255)
                                                                                                                             tgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                >  2:389087‑M2/14‑103 (MQ=255)
                                                                                                                                 gatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCa        >  2:341254‑M2/10‑139 (MQ=255)
                                                                                                                                  atgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTCTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCAc       <  1:52241‑M2/131‑1 (MQ=255)
                                                                                                                                       ccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGcc  >  1:686788‑M2/4‑139 (MQ=255)
                                                                                                                                          |                                                                                                                                       
TAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCC  >  NC_000913/2893826‑2894099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: