| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,614,614 | Δ3 bp | coding (681‑683/849 nt) | focB → | putative formate transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2614614 | 2614616 | 3 | 57 [0] | [0] 53 | focB | putative formate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2614613 | 0 (0.000) | 53 (0.940) | 45/198 | 0.1 | 100% | coding (680/849 nt) | focB | putative formate transporter |
| ? | NC_000913 | 2614617 = | 0 (0.000) | coding (684/849 nt) | focB | putative formate transporter | |||||
TTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTAT > NC_000913/2614479‑2614745 | ttattgcgggcgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccc > 1:270305‑M2/139‑139 (MQ=255) gcgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTgg > 2:522542‑M2/130‑139 (MQ=255) acaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAg > 1:899143‑M2/116‑139 (MQ=255) tgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGca > 2:556051‑M2/95‑115 (MQ=255) tgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGca < 1:556051‑M2/21‑1 (MQ=255) tcactcggtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattctgttcgccattgcgattcgccatttctacccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCGTACAATTTTCCGGCACTGAc > 2:206091‑M2/89‑139 (MQ=255) tgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCAt > 2:903538‑M2/79‑139 (MQ=255) gtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt < 1:21294‑M2/54‑1 (MQ=255) gtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt > 2:21294‑M2/78‑131 (MQ=255) gtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCAtt > 1:124703‑M2/78‑139 (MQ=255) cgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGc > 2:1191507‑M2/76‑89 (MQ=255) cgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGc < 1:1191507‑M2/14‑1 (MQ=255) gccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGgcg > 1:65141‑M2/75‑93 (MQ=255) gccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGgcg < 2:65141‑M2/19‑1 (MQ=255) gccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTa > 1:643244‑M2/75‑100 (MQ=255) gccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTa < 2:643244‑M2/26‑1 (MQ=255) gtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTAc > 2:1464023‑M2/71‑139 (MQ=255) ggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCg < 2:899143‑M2/71‑1 (MQ=255) gctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGc < 2:270305‑M2/72‑1 (MQ=255) tgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAAt < 1:522542‑M2/76‑1 (MQ=255) tgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTcc > 1:76853‑M2/57‑139 (MQ=255) ctgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgcccCCCCTTCTg > 2:1448288‑M2/57‑65 (MQ=255) ctgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgcccCCCCTTCTg < 1:1448288‑M2/9‑1 (MQ=255) atcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCgg < 2:76853‑M2/86‑1 (MQ=255) cgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTg > 1:1485213‑M2/52‑139 (MQ=255) caatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg < 2:124703‑M2/91‑1 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGc < 1:210544‑M2/11‑1 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGc > 2:210544‑M2/45‑55 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGgcg < 2:1047525‑M2/19‑1 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGgcg > 1:1047525‑M2/45‑63 (MQ=255) gtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGt < 1:1286114‑M2/97‑1 (MQ=255) tgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTc > 1:773951‑M2/38‑78 (MQ=255) tgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTc < 2:773951‑M2/41‑1 (MQ=255) attccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTttat > 1:1504949‑M2/36‑101 (MQ=255) attccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTttat < 2:1504949‑M2/66‑1 (MQ=255) cgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTTCGGCACTGACCGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATcgg > 2:684084‑M2/32‑139 (MQ=255) cgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg > 2:979421‑M2/32‑122 (MQ=255) cgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg < 1:979421‑M2/91‑1 (MQ=255) ttcgccattgccattcgccatttcgcccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATcggcgg > 1:1165843‑M2/29‑139 (MQ=255) cgccattgccattcgccatttcgccccCCCCTTCTGGCAGc > 1:927379‑M2/28‑41 (MQ=255) cgccattgccattcgccatttcgccccCCCCTTCTGGCAGc < 2:927379‑M2/14‑1 (MQ=255) cgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTcc > 2:1260933‑M2/28‑69 (MQ=255) cgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTcc < 1:1260933‑M2/42‑1 (MQ=255) cgccattgccattcgccatttcgcccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtg < 2:1165843‑M2/113‑1 (MQ=255) cattgccattcgccatttcgccccCCCCTACTGGCAGCTGGCGCACAGTAGCGCAGACAATCTTCCGGCACTGACGGTCAGCCATCTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtgcg < 1:206091‑M2/115‑1 (MQ=255) tgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGa > 2:1279573‑M2/22‑71 (MQ=255) tgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGa < 1:1279573‑M2/50‑1 (MQ=255) ttcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGt > 2:736360‑M2/17‑139 (MQ=255) ttcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGt < 1:684084‑M2/123‑1 (MQ=255) cgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCt < 1:81020‑M2/78‑1 (MQ=255) cgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCt > 2:81020‑M2/15‑92 (MQ=255) gccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAg < 2:1485213‑M2/126‑1 (MQ=255) atttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTAt < 1:903538‑M2/129‑1 (MQ=255) | TTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTAT > NC_000913/2614479‑2614745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |