| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,432,994 | (C)6→9 | coding (567/1125 nt) | smf ← | DNA recombination‑mediator A family protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3432988 | 0 (0.000) | 53 (1.140) +CCC |
40/198 | 0.1 | 100% | coding (573/1125 nt) | smf | DNA recombination‑mediator A family protein |
| ? | NC_000913 | 3432989 = | 0 (0.000) | coding (572/1125 nt) | smf | DNA recombination‑mediator A family protein | |||||
TCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTGTAAGGCT > NC_000913/3432855‑3433096 | ccagcgaaccactacgcaaagccgcttccaccaccagtacacctttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccccccc < 2:549711‑M2/5‑1 (MQ=255) cgaaccactacgcaaagccgcttccaccaccagtacacctttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGt > 2:101891‑M2/131‑139 (MQ=255) gaaccactacgcaaagccgcttccaccaccagtacacctttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGtt < 1:101891‑M2/10‑1 (MQ=255) accactacgcaaagccgcttccaccaccagtacacctttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCa > 1:286992‑M2/128‑139 (MQ=255) cgcttccaccaccagtacacctttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaatgggtggaacatcgaggggaaattccgagacgagagcgccccccc < 2:786011‑M2/4‑1 (MQ=255) cgcttccaccaccagtacacctttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgccccccc > 1:786011‑M2/113‑116 (MQ=255) cttccaccaccagtacacctttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgccccCCCCCCTGTTCAAGCAGACTGGCAGCCa > 1:1110530‑M2/112‑139 (MQ=255) ccaccagtacacctttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGc > 1:201769‑M2/105‑139 (MQ=255) agtacacctttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgccccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGa < 2:1110530‑M2/39‑1 (MQ=255) cacctttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGAcggcg < 1:985134‑M2/44‑1 (MQ=255) ttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGAt < 2:562255‑M2/49‑1 (MQ=255) ttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGAt > 2:551801‑M2/91‑139 (MQ=255) ttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGAt < 2:292744‑M2/49‑1 (MQ=255) ttacttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGAt > 1:878156‑M2/91‑139 (MQ=255) ttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAAt < 2:207482‑M2/53‑1 (MQ=255) ttagaccactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAAt < 1:864536‑M2/53‑1 (MQ=255) accactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCgggg > 1:511361‑M2/83‑129 (MQ=255) accactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCgggg < 2:511361‑M2/47‑1 (MQ=255) accactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAAt > 2:414751‑M2/83‑135 (MQ=255) accactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAAt < 1:414751‑M2/53‑1 (MQ=255) accactgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTa > 2:369915‑M2/83‑139 (MQ=255) actgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgggagcgccccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTAtt < 1:483199‑M2/59‑1 (MQ=255) ctgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgccccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTa > 1:532226‑M2/80‑139 (MQ=255) tgataatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAg > 2:687566‑M2/78‑139 (MQ=255) tgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgccctcCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa < 2:649072‑M2/66‑1 (MQ=255) aatgcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa < 1:369915‑M2/66‑1 (MQ=255) gcgatttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTc < 2:878156‑M2/69‑1 (MQ=255) atttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGAcgg < 2:467286‑M2/42‑1 (MQ=255) atttcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGAcgg > 1:467286‑M2/68‑109 (MQ=255) tcttcgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAAt < 2:201769‑M2/75‑1 (MQ=255) cgtgggaaattgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAg > 1:7272‑M2/61‑139 (MQ=255) ttgtaagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGa < 2:286992‑M2/88‑1 (MQ=255) taagcaaggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCTGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGc > 2:723798‑M2/49‑139 (MQ=255) gggtggaacatcgaggggaaattccgagacgagagcgccccCCCCCCTGTTCAAGCAGCCTGGCAGCCAGTCGGGCATGACGGAGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTAc > 1:592193‑M2/42‑139 (MQ=255) ggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTAtt > 1:220730‑M2/42‑100 (MQ=255) ggggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTAtt < 2:220730‑M2/59‑1 (MQ=255) gggtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTAcc > 1:663108‑M2/41‑139 (MQ=255) gtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAg < 1:308538‑M2/25‑1 (MQ=255) gtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAg > 2:308538‑M2/39‑63 (MQ=255) gtggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTg > 2:626067‑M2/39‑139 (MQ=255) tggaacatcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTGt < 1:551801‑M2/102‑1 (MQ=255) acatcgaggggcaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTATCTGTAAgg < 1:723798‑M2/106‑1 (MQ=255) atcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTGTAAGgct < 1:687566‑M2/108‑1 (MQ=255) tcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAAt < 1:906965‑M2/53‑1 (MQ=255) tcgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAAt > 2:906965‑M2/31‑83 (MQ=255) cgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAAt > 2:205736‑M2/30‑82 (MQ=255) cgaggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAAt < 1:205736‑M2/53‑1 (MQ=255) agggtaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa < 1:704722‑M2/66‑1 (MQ=255) aggggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGTATGGTATTAAGTCCa > 2:704722‑M2/28‑93 (MQ=255) gggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTg > 1:949798‑M2/26‑126 (MQ=255) gggaaattccgagacgagagcgcccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTg < 2:949798‑M2/101‑1 (MQ=255) gagcgccccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGa > 1:212804‑M2/10‑60 (MQ=255) gagcgccccCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGa < 2:212804‑M2/51‑1 (MQ=255) | TCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCCCCTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTGTAAGGCT > NC_000913/3432855‑3433096 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |