| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,614,614 | Δ3 bp | coding (681‑683/849 nt) | focB → | putative formate transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2614614 | 2614616 | 3 | 61 [0] | [0] 57 | focB | putative formate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2614613 | 0 (0.000) | 57 (1.220) | 41/212 | 0.1 | 100% | coding (680/849 nt) | focB | putative formate transporter |
| ? | NC_000913 | 2614617 = | 0 (0.000) | coding (684/849 nt) | focB | putative formate transporter | |||||
ATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTG > NC_000913/2614478‑2614748 | aTTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccc > 1:1021308‑M1/1‑136 (MQ=255) tGCGGGCGTTCGTTATGCGACAAAATCCTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGTGCACGGTATCGCCAATTTGCTTGTGATTCCGTTTGCCATTGCCATTCGCCATTTCG‑CCCCcccct > 2:203409‑M1/1‑134 (MQ=255) gCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctgg > 2:827110‑M1/1‑129 (MQ=255) gCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctgg > 2:406924‑M1/1‑129 (MQ=255) cgttcgttATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCCccccttctgg > 1:1085516‑M1/1‑129 (MQ=255) tcgttATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagc < 1:1052723‑M1/139‑15 (MQ=255) aCAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacag > 1:439809‑M1/1‑115 (MQ=255) aCAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcg > 1:283894‑M1/1‑115 (MQ=255) aCAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcg < 2:283894‑M1/134‑20 (MQ=255) aaaaTCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagta > 2:46271‑M1/1‑113 (MQ=255) gTTTGTCGCCAGTGGCTTTGAGTACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagc < 1:635289‑M1/139‑59 (MQ=255) gTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCTTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagc < 2:541701‑M1/139‑59 (MQ=255) tGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagc < 2:861571‑M1/92‑15 (MQ=255) tGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagc > 1:861571‑M1/1‑78 (MQ=255) gTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactg > 2:50750‑M1/1‑77 (MQ=255) gTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactg < 1:50750‑M1/126‑50 (MQ=255) gTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctg > 2:984665‑M1/1‑77 (MQ=255) gTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctg < 1:984665‑M1/93‑17 (MQ=255) cGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCAGTTCGCCATTGCCATTCGCCATTTCG‑CCCC < 1:155993‑M1/75‑1 (MQ=255) cGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCAGTTCGCCATTGCCATTCGCCATTTCG‑CCCC > 2:155993‑M1/1‑75 (MQ=255) gTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagc < 1:1032837‑M1/84‑15 (MQ=255) gTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagc > 2:1032837‑M1/1‑70 (MQ=255) gCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctg < 1:406924‑M1/139‑80 (MQ=255) cACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCC > 1:313232‑M1/1‑59 (MQ=255) cACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCC < 2:313232‑M1/59‑1 (MQ=255) tGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcc > 1:177867‑M1/1‑56 (MQ=255) tATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccg > 2:615503‑M1/1‑54 (MQ=255) cGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcg > 2:466304‑M1/1‑51 (MQ=255) cGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcg < 1:466304‑M1/70‑20 (MQ=255) ccAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgat < 1:827110‑M1/139‑91 (MQ=255) ccAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgat > 2:920813‑M1/1‑49 (MQ=255) cAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcattgacggtcagccattttattaccgccaatctgctcccggtgatg < 2:1015067‑M1/139‑92 (MQ=255) cAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatg < 1:160210‑M1/139‑92 (MQ=255) aaTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatg < 2:1085516‑M1/139‑92 (MQ=255) aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgct < 1:46271‑M1/139‑94 (MQ=255) aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagc < 1:938522‑M1/104‑59 (MQ=255) aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagc > 2:938522‑M1/1‑46 (MQ=255) ttgtttgtGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttcttgcagctg > 2:218976‑M1/1‑44 (MQ=255) ttgtttgtGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctg < 1:218976‑M1/60‑17 (MQ=255) tgtgATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaat > 2:614022‑M1/1‑39 (MQ=255) gATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatatt > 1:625783‑M1/1‑36 (MQ=255) aTTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatatta > 1:77112‑M1/1‑35 (MQ=255) aTTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggt > 2:1088134‑M1/1‑35 (MQ=255) aTTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggt < 1:1088134‑M1/89‑55 (MQ=255) ttCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattat < 2:625783‑M1/139‑106 (MQ=255) cGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcgg > 1:507588‑M1/1‑31 (MQ=255) cGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgct < 1:339129‑M1/112‑82 (MQ=255) cGTTCGCCATTGCCATTCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattacagcaaatctgct > 2:339129‑M1/1‑31 (MQ=255) gccattgccattCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtg < 1:614022‑M1/139‑114 (MQ=255) cattgccattCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcg < 1:615503‑M1/139‑116 (MQ=255) gccattCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgc < 2:252216‑M1/139‑120 (MQ=255) gccattCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgc < 2:507588‑M1/139‑120 (MQ=255) cattCGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctg < 1:203409‑M1/139‑122 (MQ=255) ttCGCCTTTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggacagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggt < 2:1021308‑M1/139‑124 (MQ=255) cGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggtga > 1:511188‑M1/1‑14 (MQ=255) cGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctg > 2:697785‑M1/1‑14 (MQ=255) cGCCATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctg < 1:697785‑M1/108‑95 (MQ=255) cATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctg < 2:104794‑M1/132‑122 (MQ=255) cATTTCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctg > 1:104794‑M1/1‑11 (MQ=255) tttCG‑CCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgtggtgctggtgagtatg < 1:920813‑M1/139‑131 (MQ=255) ccccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggtgagtatgtgtta > 2:848361‑M1/1‑4 (MQ=255) | ATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCG‑CCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTG > NC_000913/2614478‑2614748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |