| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,614,614 | Δ3 bp | coding (681‑683/849 nt) | focB → | putative formate transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2614614 | 2614616 | 3 | 61 [0] | [0] 57 | focB | putative formate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2614613 | 0 (0.000) | 57 (1.220) | 41/212 | 0.1 | 100% | coding (680/849 nt) | focB | putative formate transporter |
| ? | NC_000913 | 2614617 = | 0 (0.000) | coding (684/849 nt) | focB | putative formate transporter | |||||
GCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTA > NC_000913/2614481‑2614751 | attgcgggcgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccccc > 1:1021308‑M2/137‑139 (MQ=255) tgcgggcgttcgttatgcgacaaaatcctcgccatgattttgcccatcaccctgtttgtcgccagtggctttgtgcacggtatcgccaatttgcttgtgattccgtttgccattgccattcgccatttcgccccCCCCt > 2:203409‑M2/135‑139 (MQ=255) gcgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTgg > 2:827110‑M2/130‑139 (MQ=255) gcgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTgg > 2:406924‑M2/130‑139 (MQ=255) cgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgcccccCCCCTTCTgg > 1:1085516‑M2/130‑139 (MQ=255) tcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGc < 1:1052723‑M2/14‑1 (MQ=255) acaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGgcg > 1:283894‑M2/116‑134 (MQ=255) acaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGgcg < 2:283894‑M2/19‑1 (MQ=255) acaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAg > 1:439809‑M2/116‑139 (MQ=255) aaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTa > 2:46271‑M2/114‑139 (MQ=255) gtttgtcgccagtggctttgagtactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 1:635289‑M2/58‑1 (MQ=255) gtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattcctttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 2:541701‑M2/58‑1 (MQ=255) tgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGc < 2:861571‑M2/14‑1 (MQ=255) tgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGc > 1:861571‑M2/79‑92 (MQ=255) gtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTg > 2:984665‑M2/78‑93 (MQ=255) gtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTg < 1:984665‑M2/16‑1 (MQ=255) gtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTg > 2:50750‑M2/78‑126 (MQ=255) gtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTg < 1:50750‑M2/49‑1 (MQ=255) gtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGc < 1:1032837‑M2/14‑1 (MQ=255) gtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGc > 2:1032837‑M2/71‑84 (MQ=255) gcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTg < 1:406924‑M2/79‑1 (MQ=255) tgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTcc > 1:177867‑M2/57‑139 (MQ=255) tatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCg > 2:615503‑M2/55‑139 (MQ=255) cgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGgcg > 2:466304‑M2/52‑70 (MQ=255) cgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGgcg < 1:466304‑M2/19‑1 (MQ=255) ccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGAt < 1:827110‑M2/90‑1 (MQ=255) ccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGAt > 2:920813‑M2/50‑139 (MQ=255) caatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCATTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg < 2:1015067‑M2/91‑1 (MQ=255) caatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg < 1:160210‑M2/91‑1 (MQ=255) aatttgtttgtgattccgttcgccattgccattcgccatttcgcccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg < 2:1085516‑M2/91‑1 (MQ=255) atttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 1:938522‑M2/58‑1 (MQ=255) atttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc > 2:938522‑M2/47‑104 (MQ=255) atttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCt < 1:46271‑M2/93‑1 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTTGCAGCTg > 2:218976‑M2/45‑60 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTg < 1:218976‑M2/16‑1 (MQ=255) tgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAat > 2:614022‑M2/40‑139 (MQ=255) gattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAAtatt > 1:625783‑M2/37‑139 (MQ=255) attccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt > 2:1088134‑M2/36‑89 (MQ=255) attccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt < 1:1088134‑M2/54‑1 (MQ=255) attccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAAtatta > 1:77112‑M2/36‑139 (MQ=255) ttccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAAtattat < 2:625783‑M2/105‑1 (MQ=255) cgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCt < 1:339129‑M2/81‑1 (MQ=255) cgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATcgg > 1:507588‑M2/32‑139 (MQ=255) cgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACAGCAAATCTGCt > 2:339129‑M2/32‑112 (MQ=255) gccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtg < 1:614022‑M2/113‑1 (MQ=255) cattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtgcg < 1:615503‑M2/115‑1 (MQ=255) gccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCggtgcggtgc < 2:252216‑M2/119‑1 (MQ=255) gccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCggtgcggtgc < 2:507588‑M2/119‑1 (MQ=255) cattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTg < 1:203409‑M2/121‑1 (MQ=255) ttcgccttttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGACAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGt < 2:1021308‑M2/123‑1 (MQ=255) cgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTg > 2:697785‑M2/15‑108 (MQ=255) cgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTg < 1:697785‑M2/94‑1 (MQ=255) cgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGa > 1:511188‑M2/15‑139 (MQ=255) catttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTg < 2:104794‑M2/121‑1 (MQ=255) catttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTg > 1:104794‑M2/12‑132 (MQ=255) tttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGTGGTGCTGGTGAGTAtg < 1:920813‑M2/130‑1 (MQ=255) ccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTa > 2:848361‑M2/5‑139 (MQ=255) | GCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTA > NC_000913/2614481‑2614751 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |