| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,757,753 | Δ5 bp | coding (969‑973/1005 nt) | ldtE ← | murein L,D‑transpeptidase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1757753 | 1757757 | 5 | 51 [0] | [0] 49 | ldtE | murein L,D‑transpeptidase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1757752 | 0 (0.000) | 49 (0.830) | 32/208 | 0.6 | 100% | coding (974/1005 nt) | ldtE | murein L,D‑transpeptidase |
| ? | NC_000913 | 1757758 = | 0 (0.000) | coding (968/1005 nt) | ldtE | murein L,D‑transpeptidase | |||||
GTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCTT > NC_000913/1757623‑1757893 | ccagcgtctggacaacatggctactaaataccgcaagtaatagtacctgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCAc > 2:495999‑M2/136‑139 (MQ=255) cgtctggacaacatggctactaaataccgcaagtaatagtacctgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCAtt > 1:337768‑M2/132‑139 (MQ=255) acaacatggctactaaataccgcaagtaatagtacctgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCt < 1:495999‑M2/15‑1 (MQ=255) tacctgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCggg < 2:1158931‑M2/47‑1 (MQ=255) tgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCAtt < 2:210352‑M2/8‑1 (MQ=255) tgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCAtt > 1:210352‑M2/89‑96 (MQ=255) tgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGtt > 1:358260‑M2/89‑139 (MQ=255) cgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCt > 2:285085‑M2/72‑86 (MQ=255) cgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCt < 1:285085‑M2/15‑1 (MQ=255) gcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGaa < 2:358260‑M2/69‑1 (MQ=255) cacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGActc < 2:411345‑M2/20‑1 (MQ=255) cacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGActc > 1:411345‑M2/70‑89 (MQ=255) tgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCAc > 1:1094056‑M2/63‑127 (MQ=255) tgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCAc < 2:1094056‑M2/65‑1 (MQ=255) tgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATa < 2:337768‑M2/77‑1 (MQ=255) gccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATAccc > 2:1253169‑M2/60‑139 (MQ=255) cattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTg < 1:1253169‑M2/82‑1 (MQ=255) cattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTg > 2:1200587‑M2/58‑139 (MQ=255) cattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTg > 2:1198516‑M2/58‑139 (MQ=255) attttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGc > 2:257147‑M2/57‑139 (MQ=255) attttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGc > 1:566729‑M2/57‑139 (MQ=255) ttttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGcc < 1:257147‑M2/84‑1 (MQ=255) ttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGAc > 2:1243459‑M2/33‑139 (MQ=255) cgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCggg < 2:1232106‑M2/47‑1 (MQ=255) cgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCggg > 1:1232106‑M2/27‑73 (MQ=255) cgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACaa < 1:1016034‑M2/95‑1 (MQ=255) cgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACaa > 2:1016034‑M2/27‑121 (MQ=255) cgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACg < 2:681724‑M2/97‑1 (MQ=255) cgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACg > 1:681724‑M2/27‑123 (MQ=255) tcacgcgtaacatattcccttgctTCACCATTCTGCGCt > 2:1292664‑M2/25‑39 (MQ=255) tcacgcgtaacatattcccttgctTCACCATTCTGCGCt < 1:1292664‑M2/15‑1 (MQ=255) cgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTg < 1:228298‑M2/36‑1 (MQ=255) cgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTg > 2:228298‑M2/22‑57 (MQ=255) ttcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTa > 2:1175644‑M2/11‑139 (MQ=255) ttcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTa < 2:566729‑M2/129‑1 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCggg < 1:186152‑M2/47‑1 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCggg > 2:186152‑M2/5‑51 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCcgacga < 1:271460‑M2/90‑1 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCcgacga > 2:271460‑M2/5‑94 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTc > 2:506063‑M2/5‑118 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTc < 1:506063‑M2/114‑1 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCt > 1:1397743‑M2/5‑139 (MQ=255) tctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTAt > 2:891801‑M2/4‑106 (MQ=255) gctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTg > 2:279432‑M2/4‑39 (MQ=255) gctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTg < 1:279432‑M2/36‑1 (MQ=255) gctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTAt < 1:891801‑M2/103‑1 (MQ=255) gctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACt < 2:1202057‑M2/108‑1 (MQ=255) gctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACt > 1:1202057‑M2/4‑111 (MQ=255) gctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCtt > 1:63478‑M2/4‑139 (MQ=255) | GTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCTT > NC_000913/1757623‑1757893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |