| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,931,183 | (G)7→10 | intergenic (‑90/‑133) | ravA ← / → kup | hexameric AAA+ MoxR family ATPase, putative molecular chaperone/potassium transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3931176 | 4 (0.070) | 44 (0.710) +GGG |
35/188 | 0.4 | 91.6% | intergenic (‑83/‑140) | ravA/kup | hexameric AAA+ MoxR family ATPase, putative molecular chaperone/potassium transporter |
| ? | NC_000913 | 3931177 = | 4 (0.060) | intergenic (‑84/‑139) | ravA/kup | hexameric AAA+ MoxR family ATPase, putative molecular chaperone/potassium transporter | |||||
GAACTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAA‑GG‑‑GGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGCACACATTTCATATTTCAACGAA > NC_000913/3931044‑3931305 | gAACTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggg > 1:747885‑M1/1‑133 (MQ=255) aCTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggg > 2:897018‑M1/1‑131 (MQ=255) tGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggt > 2:628625‑M1/1‑129 (MQ=255) cGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGG‑‑GGGGGTATTTTTCtt < 1:897018/139‑1 (MQ=255) aaaTTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctt > 1:806186‑M1/1‑117 (MQ=255) aaaTTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctt < 2:806186‑M1/136‑20 (MQ=255) aTTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagc < 2:512387‑M1/139‑25 (MQ=255) aataaATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtg > 1:1421922‑M1/1‑103 (MQ=255) ataaATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtgg < 2:1547812‑M1/139‑38 (MQ=255) gggTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcattt > 2:285432‑M1/1‑94 (MQ=255) gTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttag > 2:577411‑M1/1‑92 (MQ=255) aGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggag > 1:46450‑M1/1‑89 (MQ=255) aGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGG‑‑GGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGt > 1:1261081/1‑139 (MQ=255) gCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagt > 2:1315474‑M1/1‑88 (MQ=255) aGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgc > 1:1561680‑M1/1‑78 (MQ=255) tGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccg > 2:1473262‑M1/1‑76 (MQ=255) ggCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgt < 2:970767‑M1/139‑65 (MQ=255) gCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgtt > 2:735062‑M1/1‑74 (MQ=255) gCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgtt > 2:154467‑M1/1‑74 (MQ=255) gCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGG‑‑GGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTa > 2:536707/1‑139 (MQ=255) cGTCCTTTCTTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgtta < 2:786466‑M1/139‑67 (MQ=255) cGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgtta < 1:154467‑M1/139‑67 (MQ=255) tCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaat > 1:870286‑M1/1‑71 (MQ=255) tCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaat < 2:870286‑M1/139‑69 (MQ=255) cTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcg < 1:285432‑M1/139‑71 (MQ=255) tCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttag > 2:1149490‑M1/1‑66 (MQ=255) tCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttag < 1:1149490‑M1/113‑48 (MQ=255) cGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgag > 1:809284‑M1/1‑51 (MQ=255) cGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgag < 2:809284‑M1/74‑24 (MQ=255) cGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggcc < 1:628625‑M1/139‑98 (MQ=255) aGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTATCACA‑GGGAGGGGGTATCTGTCTTTGAGCCAGGTTAAAGTAGGCGCATTTAGGAGTACGATTTTCATGTTAATCGTTGCTACTGTGCCATTTTTTGTGGCCCaa > 1:1026427/1‑139 (MQ=255) ttCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagca < 2:747885‑M1/139‑111 (MQ=255) ttCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgag < 2:1374512‑M1/52‑24 (MQ=255) ttCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgag > 1:1374512‑M1/1‑29 (MQ=255) ttCTGGCTGGTGGGTAAAATAATCTCAAAgggggggggtaattttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagca < 2:306556‑M1/139‑111 (MQ=255) tCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtgg > 2:1119689‑M1/1‑28 (MQ=255) tCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtgg < 1:1119689‑M1/65‑38 (MQ=255) tCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagc < 2:1611627‑M1/52‑25 (MQ=255) tCTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagc > 1:1611627‑M1/1‑28 (MQ=255) cTTGCTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcaca < 2:46450‑M1/139‑113 (MQ=255) cTGGTGGCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatt > 2:169416‑M1/1‑23 (MQ=255) tggCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagc < 2:164818‑M1/128‑110 (MQ=255) tggCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagc > 1:164818‑M1/1‑19 (MQ=255) tggCTAAAATAGTCTCAAAggggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaat < 2:137357‑M1/88‑70 (MQ=255) tggCTAAAATAGTCTCAAAggggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaat > 1:137357‑M1/1‑19 (MQ=255) ggCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgtta > 1:1033883‑M1/1‑18 (MQ=255) ggCTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgtta < 2:1033883‑M1/84‑67 (MQ=255) cTAAAATAGTCTCAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatt < 1:1473262‑M1/139‑124 (MQ=255) tctcAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaa > 2:1558047‑M1/1‑7 (MQ=255) tctcAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaa > 1:1257218‑M1/1‑7 (MQ=255) tctcAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaaggg > 2:1158739‑M1/1‑7 (MQ=255) tctcAAAgggggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaaggg < 1:1158739‑M1/109‑103 (MQ=255) | GAACTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAA‑GG‑‑GGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGCACACATTTCATATTTCAACGAA > NC_000913/3931044‑3931305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |