| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,614,614 | Δ4 bp | coding (681‑684/849 nt) | focB → | putative formate transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2614614 | 2614617 | 4 | 59 [0] | [0] 60 | focB | putative formate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2614613 | 0 (0.000) | 58 (1.110) | 43/202 | 0.1 | 100% | coding (680/849 nt) | focB | putative formate transporter |
| ? | NC_000913 | 2614618 = | 0 (0.000) | coding (685/849 nt) | focB | putative formate transporter | |||||
TGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTATCGGG > NC_000913/2614480‑2614756 | ttactgcgggcgttcgttatacgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccagtcgccatttcgccccc > 2:928484‑M2/139‑139 (MQ=255) attgcgggcgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccccc > 2:92499‑M2/137‑139 (MQ=255) tcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGc > 2:908345‑M2/110‑122 (MQ=255) tcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGc < 1:908345‑M2/13‑1 (MQ=255) gtcgccatgattttccccatcaccctgtttgtcgccagcggctttgagcactgtatcgccaacttgtttgtgattccgttcgccattaccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGa < 2:836903‑M2/32‑1 (MQ=255) tttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCgg < 2:503573‑M2/43‑1 (MQ=255) tttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCgg < 1:1183533‑M2/43‑1 (MQ=255) cccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAgcg > 2:249682‑M2/93‑120 (MQ=255) cccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAgcg < 1:249682‑M2/28‑1 (MQ=255) atcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGc > 1:377563‑M2/90‑102 (MQ=255) atcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGc < 2:377563‑M2/13‑1 (MQ=255) tgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc > 1:102639‑M2/83‑139 (MQ=255) tgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc > 2:861669‑M2/83‑139 (MQ=255) gtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCAttt > 2:1055576‑M2/78‑139 (MQ=255) gccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTttat > 2:241281‑M2/75‑139 (MQ=255) gtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTAcc > 1:1073082‑M2/71‑139 (MQ=255) gtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTAcc > 2:325256‑M2/71‑139 (MQ=255) ggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGc < 1:1055576‑M2/71‑1 (MQ=255) tttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCaa < 1:92499‑M2/74‑1 (MQ=255) ttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAAt < 1:861669‑M2/75‑1 (MQ=255) ttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAAt > 1:1323764‑M2/65‑139 (MQ=255) ttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAAt < 2:1340180‑M2/75‑1 (MQ=255) gagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGc < 1:542856‑M2/10‑1 (MQ=255) gagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGc > 2:542856‑M2/63‑72 (MQ=255) gcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGc < 1:325256‑M2/79‑1 (MQ=255) ctgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTcc > 2:35223‑M2/58‑139 (MQ=255) cgccaatttgtttgtgattccgttcgccattgccattcgccatttcgcccccc < 1:1140607‑M2/2‑1 (MQ=255) cgccaatttgtttgtgattccgttcgccattgccattcgccatttcgcccccc > 2:1140607‑M2/52‑53 (MQ=255) cgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGc > 1:1165974‑M2/52‑64 (MQ=255) cgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGc < 2:1165974‑M2/13‑1 (MQ=255) atttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCt < 2:986062‑M2/92‑1 (MQ=255) atttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCt > 1:986062‑M2/47‑138 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTttat < 1:421965‑M2/65‑1 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTttat > 2:421965‑M2/45‑109 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTggg < 2:1323764‑M2/95‑1 (MQ=255) gtttgtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTa < 1:491927‑M2/97‑1 (MQ=255) gtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACt > 2:1363606‑M2/39‑85 (MQ=255) gtgattccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACt < 1:1363606‑M2/47‑1 (MQ=255) attccgttcgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAAtattat > 2:1314112‑M2/36‑139 (MQ=255) cgccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtg < 2:102639‑M2/112‑1 (MQ=255) ccattgccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtgcg < 2:1286764‑M2/114‑1 (MQ=255) ccattcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTg < 2:1073082‑M2/120‑1 (MQ=255) attcgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGt < 1:241281‑M2/122‑1 (MQ=255) cgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt > 2:864398‑M2/15‑67 (MQ=255) cgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt < 1:864398‑M2/53‑1 (MQ=255) cgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAAt > 1:1294221‑M2/15‑89 (MQ=255) cgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAAt < 1:488143‑M2/75‑1 (MQ=255) cgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAAt > 2:488143‑M2/15‑89 (MQ=255) cgccatttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAAt < 2:1294221‑M2/75‑1 (MQ=255) catttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACaa < 2:90169‑M2/35‑1 (MQ=255) catttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACaa > 1:90169‑M2/12‑46 (MQ=255) atttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGt < 1:586309‑M2/122‑1 (MQ=255) atttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGt > 2:586309‑M2/11‑132 (MQ=255) ttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc > 1:344303‑M2/9‑65 (MQ=255) ttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 2:344303‑M2/57‑1 (MQ=255) ttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGTCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtg < 1:211907‑M2/112‑1 (MQ=255) ttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGTCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtg > 2:211907‑M2/9‑120 (MQ=255) ttcgccccCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGACACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTAtgtg > 2:842966‑M2/9‑139 (MQ=255) cCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTATCgg < 2:1054238‑M2/138‑1 (MQ=255) cccTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTATCggg < 1:842966/139‑1 (MQ=255) | TGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTATCGGG > NC_000913/2614480‑2614756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |