| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,614,614 | Δ4 bp | coding (681‑684/849 nt) | focB → | putative formate transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2614614 | 2614617 | 4 | 59 [0] | [0] 60 | focB | putative formate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2614613 | 0 (0.000) | 58 (1.110) | 43/202 | 0.1 | 100% | coding (680/849 nt) | focB | putative formate transporter |
| ? | NC_000913 | 2614618 = | 0 (0.000) | coding (685/849 nt) | focB | putative formate transporter | |||||
TTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTA > NC_000913/2614476‑2614751 | ttACTGCGGGCGTTCGTTATACGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCAGTCGCCATTTCGCCCCc > 2:928484‑M1/1‑138 (MQ=255) aTTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccc > 2:92499‑M1/1‑136 (MQ=255) tcgtcgCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagc > 2:908345‑M1/1‑109 (MQ=255) tcgtcgCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagc < 1:908345‑M1/122‑14 (MQ=255) gtcgCCATGATTTTCCCCATCACCCTGTTTGTCGCCAGCGGCTTTGAGCACTGTATCGCCAACTTGTTTGTGATTCCGTTCGCCATTACCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcaga < 2:836903‑M1/139‑33 (MQ=255) tttGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccgg < 2:503573‑M1/139‑44 (MQ=255) tttGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccgg < 1:1183533‑M1/139‑44 (MQ=255) cccATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcg > 2:249682‑M1/1‑92 (MQ=255) cccATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcg < 1:249682‑M1/120‑29 (MQ=255) aTCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagc > 1:377563‑M1/1‑89 (MQ=255) aTCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagc < 2:377563‑M1/102‑14 (MQ=255) tGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagc > 1:102639‑M1/1‑82 (MQ=255) tGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagc > 2:861669‑M1/1‑82 (MQ=255) gTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattt > 2:1055576‑M1/1‑77 (MQ=255) gCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttat > 2:241281‑M1/1‑74 (MQ=255) gTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattacc > 1:1073082‑M1/1‑70 (MQ=255) gTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattacc > 2:325256‑M1/1‑70 (MQ=255) ggCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgc < 1:1055576‑M1/139‑72 (MQ=255) tttGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaa < 1:92499‑M1/139‑75 (MQ=255) ttGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaat < 1:861669‑M1/139‑76 (MQ=255) ttGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaat > 1:1323764‑M1/1‑64 (MQ=255) ttGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaat < 2:1340180‑M1/139‑76 (MQ=255) gAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggc < 1:542856‑M1/72‑11 (MQ=255) gAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggc > 2:542856‑M1/1‑62 (MQ=255) gCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgc < 1:325256‑M1/139‑80 (MQ=255) cTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcc > 2:35223‑M1/1‑57 (MQ=255) cGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagc > 1:1165974‑M1/1‑51 (MQ=255) cGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagc < 2:1165974‑M1/64‑14 (MQ=255) cGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcc < 1:1140607‑M1/53‑3 (MQ=255) cGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcc > 2:1140607‑M1/1‑51 (MQ=255) aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgct < 2:986062‑M1/138‑93 (MQ=255) aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgct > 1:986062‑M1/1‑46 (MQ=255) ttgtttgtGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctggg < 2:1323764‑M1/139‑96 (MQ=255) ttgtttgtGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttat < 1:421965‑M1/109‑66 (MQ=255) ttgtttgtGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttat > 2:421965‑M1/1‑44 (MQ=255) gtttgtGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggta < 1:491927‑M1/139‑98 (MQ=255) gtgATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcact < 1:1363606‑M1/85‑48 (MQ=255) gtgATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcact > 2:1363606‑M1/1‑38 (MQ=255) aTTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattat > 2:1314112‑M1/1‑35 (MQ=255) cGCCATTGCCATTCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtg < 2:102639‑M1/139‑113 (MQ=255) ccattgccattCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcg < 2:1286764‑M1/139‑115 (MQ=255) ccattCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctg < 2:1073082‑M1/139‑121 (MQ=255) attCGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggt < 1:241281‑M1/139‑123 (MQ=255) cGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaat < 2:1294221‑M1/89‑76 (MQ=255) cGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaat > 1:1294221‑M1/1‑14 (MQ=255) cGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaat < 1:488143‑M1/89‑76 (MQ=255) cGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaat > 2:488143‑M1/1‑14 (MQ=255) cGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggt > 2:864398‑M1/1‑14 (MQ=255) cGCCATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggt < 1:864398‑M1/67‑54 (MQ=255) cATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaa > 1:90169‑M1/1‑11 (MQ=255) cATTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaa < 2:90169‑M1/46‑36 (MQ=255) aTTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggt > 2:586309‑M1/1‑10 (MQ=255) aTTTCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggt < 1:586309‑M1/132‑123 (MQ=255) ttCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagtcattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtg > 2:211907‑M1/1‑8 (MQ=255) ttCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagtcattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtg < 1:211907‑M1/120‑113 (MQ=255) ttCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagc > 1:344303‑M1/1‑8 (MQ=255) ttCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagc < 2:344303‑M1/65‑58 (MQ=255) ttCGCCCCcccttctggcagctggcgcacagtagcgcagacaattttccgacactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggtgagtatgtg > 2:842966‑M1/1‑8 (MQ=255) ccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggtgagtatgtgttatcgg < 2:1054238‑M1/139‑139 (MQ=255) | TTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTA > NC_000913/2614476‑2614751 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |