New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 1799309	93 (0.480)	5 (0.030)	5/410	NT	6.8%	coding (350/2388 nt)	pheT	phenylalanine‑‑tRNA ligase subunit beta
	?	NC_007779	= 1799488	48 (0.260)					coding (171/2388 nt)	pheT	phenylalanine‑‑tRNA ligase subunit beta

TTCGATAATGCCGCTGTGATCGTCAGAAATGCCCAGTTCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGG  >  NC_007779/1799251‑1799724                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                             ttCGATAATGCCGCTGTGATCGTCAGAAATGCCCAGTTCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCg                                                                                                                                                                                                                                             <  1:1075901‑M2/239‑2 (MQ=255) ttCGATAATGCCGCTGTGATCGTCAGAAATGCCCAGTTCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGGTCg                                                                                                                                                                                                                                             <  1:1458915‑M2/239‑2 (MQ=255) ttCGATAATGCCGCTGTGATCGTCAGAAATGCCCAGTTCAGAGAAGGAGCACAGCATCCATTCAGACGGCTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACAGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGCTTGTCAGCGTTCg                                                                                                                                                                                                                                             <  1:1115922‑M2/239‑2 (MQ=255)    gatgatGCCGGTGTGATCGTCAGCAATGCCCCGTTCAGAGAAGGAGCACAGCATACCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACTCGCAGTTTGTCAGCGTTCggat                                                                                                                                                                                                                                          >  2:1752848‑M2/1‑235 (MQ=255)           ccGCTGTGATCGTCAGAAATGCCCAGTTCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATGGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTgcgc                                                                                                                                                                                                                                   >  2:287749/1‑239 (MQ=255)           ccGCTGTGATCGTCAGAAATGCCCAGTTCAGAGAAGGAGAACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGACGTCCAGCAGGCGATCGCCGCCGACATTCCCTTTTGTCACACGCAGTTTGCCAGCGTTCGGATGCTgcg                                                                                                                                                                                                                                    >  2:1110837/1‑238 (MQ=255)            cGCTGTGATCGTCAGAAATGCCCAGTTCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGca                                                                                                                                                                                                                                  <  1:2038715/239‑1 (MQ=255)              cTGTGATCGTCAGAAATGCCCAGTTCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGcac                                                                                                                                                                                                                                 >  1:747971/1‑238 (MQ=255)              cTGTGATCGTCAGAAATGCCCAGTTCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGcac                                                                                                                                                                                                                                 >  2:865811/1‑238 (MQ=255)              cTGTGATCGTCAGAAATGCCCAGTTCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGcac                                                                                                                                                                                                                                 >  1:1856146/1‑238 (MQ=255)                   aTCGTCAGAAATGCCCAGTTCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCa                                                                                                                                                                                                                            >  1:1635289/1‑238 (MQ=255)                                          agaAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCTCACACTCAACCACTTCACCAACGCCCACGcc                                                                                                                                                                                                     >  2:694611/1‑238 (MQ=255)                                            aaGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTg                                                                                                                                                                                                  <  2:1075901/239‑1 (MQ=255)                                               gAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCCCAAGCAGTTTGCTCGCGTTCGGATGCTGCGCCCCACCAACCCCTTCACCAAGGAcccacccagggaa                                                                                                                                                                                               >  2:1262582/1‑228 (MQ=255)                                               gAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTgcg                                                                                                                                                                                                                                    <  2:1070490/202‑1 (MQ=255)                                               gAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTgcg                                                                                                                                                                                                                                    >  1:1070490/1‑202 (MQ=255)                                               gAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGaa                                                                                                                                                                                               >  2:476042/1‑239 (MQ=255)                                               gAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGaa                                                                                                                                                                                               >  1:169986/1‑239 (MQ=255)                                               gAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGaa                                                                                                                                                                                               >  1:726919/1‑239 (MQ=255)                                               gAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGaa                                                                                                                                                                                               >  1:2086834/1‑239 (MQ=255)                                                  cacaGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACCCAACCACTTCACCAACGACCACGCCCTGGAAGc                                                                                                                                                                                             >  2:925916/1‑238 (MQ=255)                                                       cATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCg                                                                                                                                                                                        >  1:1306016/1‑238 (MQ=255)                                                       cATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCg                                                                                                                                                                                        >  1:1247695/1‑238 (MQ=255)                                                        aTCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGc                                                                                                                                                                                          <  1:287749/235‑1 (MQ=255)                                                        aTCCCTTCAGACGGGTTGCCCCGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGcc                                                                                                                                                                                         <  2:1262565/236‑1 (MQ=255)                                                          cccTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACCCTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCa                                                                                                                                                                                     >  1:869287/1‑238 (MQ=255)                                                          cccTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCa                                                                                                                                                                                     >  1:567127/1‑238 (MQ=255)                                                           ccttcaacaggTTCGCCCGCCCGTTGCGCCGGTTTAAGTTAGAGATCACCCGGCAGAACATCACCAATGGTCGCTACCGCTACGCGCAGGCCCTGACGGCAGTTTGGCGCCCCGCAGACGAAGTCCAGCAGGGGATCGCGGCCGACATTCACTTTGGTCACACGCAGTTTGTCAGCGTTCGGAGGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCCGCAAc                                                                                                                                                                                   <  2:1635289/230‑1 (MQ=255)                                                           ccTTCCGCCGCTTCGCCAAGCAGTTTCGCCGCTTTAATTTTGAAAACACCCGGCAGAACAGCACAAATGGCCGTTACCGCTACACGCAGGCCCTGATGGCAGTTCGGCGCACAGCAGGCGAGGTCCAGCGGGCGATCGCCGCCGCCATTCGCTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCGGCCGGCAAc                                                                                                                                                                                   <  2:869287/239‑1 (MQ=255)                                                           ccTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAAc                                                                                                                                                                                   <  2:1276447/239‑1 (MQ=255)                                                           ccTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAAc                                                                                                                                                                                   <  1:865811/239‑1 (MQ=255)                                                            cTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACCCAACCACTTCACCAACGACCACGCCCGGGAACCTGCCGGCAAcc                                                                                                                                                                                  >  2:998307/1‑239 (MQ=255)                                                               cAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGCTGCTGCGCACCCTCAACCACTTCACCAGCGACCACGCCGTGGAAGCTGCCGGCAACCGGt                                                                                                                                                                               >  2:1391686/1‑239 (MQ=255)                                                                 gACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGt                                                                                                                                                                               >  1:270000/1‑237 (MQ=255)                                                                 gACGGTTCGCACCGCAGTTTCGCCGCTTTAATTTTGAAACCCCCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAAc                                                                                                                                                                                   <  2:855700/233‑1 (MQ=255)                                                                  aCGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCt                                                                                                                                                                            >  1:1547116/1‑239 (MQ=255)                                                                   cGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTa                                                                                                                                                                           <  2:169986/239‑1 (MQ=255)                                                                      ttCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCggatgctgtgctccttctctgaactgggcatttctgacgatcacagcggcattatcgaactgcctgcgga                                                                                                                                                                        <  2:1458439‑M2/239‑71 (MQ=255)                                                                       tCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTacac                                                                                                                                                                        <  1:476042/238‑1 (MQ=255)                                                                       ccGCCACGCATGTGTGCCGCTTTAATTTTGAAATCGCCCGGCAGAACTGCACCAATGGTCGCTACCGTTCCACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGAGGTCCAGCGGGCGTCCGCCGCCGACATTCTCTTTTGTCACACGCAGTTTGTCAGCGTTCTGATGCTGCGCGCACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGGTCTacac                                                                                                                                                                        <  2:1458915/237‑1 (MQ=255)                                                                           cACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTaca                                                                                                                                                                         >  1:855700/1‑233 (MQ=255)                                                                           cACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTc                                                                                                                                                                    <  1:1551048/238‑1 (MQ=255)                                                                                    tCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGGTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGCCAACCGGTTCTACACCGTCAACTTCCAg                                                                                                                                                           >  1:1676203/1‑238 (MQ=255)                                                                                                     aaaTCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCACCCGGTTCTACACCGTCAACTTCCACTCCCGCCATAGcgatttg                                                                                                                                         >  2:660597/1‑239 (MQ=255)                                                                                                          aCCCGGCAGAACAGCACCAATGTTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGCCGCACCGCAGACGAAGTCCAGCAGGCGATCGCCGCCGACATTAACTTTTGTCACACGCAGTTTGTCAGCGTTCGGACGCTGCGCACACTCAACCACTTCACCAACGACCACGCAGTGGAAGATGCCGGCAACCGGTTCTACAACGTCACCCTCCAGCACCGCCagagccctttgcttt                                                                                                                                     >  2:660910/1‑227 (MQ=255)                                                                                                          aCCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTgatttgattt                                                                                                                                     >  1:896065/1‑238 (MQ=255)                                                                                                                   aaCAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAAc                                                                                                                                                                                   <  1:841467/183‑1 (MQ=255)                                                                                                                   aaCAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAAc                                                                                                                                                                                   >  2:841467/1‑183 (MQ=255)                                                                                                                      aGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCa                                                                                                                                                                                                         >  1:1938186/1‑158 (MQ=255)                                                                                                                      aGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCa                                                                                                                                                                                                         <  2:1938186/158‑1 (MQ=255)                                                                                                                             aTGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCaa                                                                                                                  >  1:36086/1‑238 (MQ=255)                                                                                                                                  cgctaccgctacACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCg                                                                                                            >  2:1057396/1‑239 (MQ=255)                                                                                                                                   gctaccgctacACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCgg                                                                                                           >  1:2197051/1‑239 (MQ=255)                                                                                                                                            acacGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCa                                                                                                  >  1:1134700/1‑239 (MQ=255)                                                                                                                                                  aGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGCCATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGATCTACACCGTCAACTTCCAGGCCCGCCATAATGATTTGATTTGCCAGCGCCTCGCTATCAATCGCCGGGTTCACCCATTcccg                                                                                            >  1:2129564/1‑239 (MQ=255)                                                                                                                                                    gCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCggatgctgtgctccttctctgaactgggcatttctgacgatcacagcggcattatcgaactgcctgcggatgcgccgattggcaccgatatccgtgaatacctgaaacttgatgacaacaccatcgaaatcagcgtgacgccaaaccg                                                                                          <  2:432009‑M2/239‑149 (MQ=255)                                                                                                                                                    gCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATCGTGATTTGATTTGCCAGCTCATCGCGATCAATCGCCGGGTTCACCCATTCGCGTa                                                                                          >  2:1099208/1‑239 (MQ=255)                                                                                                                                                       cTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAAcc                                                                                       >  1:1791860/1‑239 (MQ=255)                                                                                                                                                                  ttGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCggatgctgtgctccttctctgaactgggcatttctgacgatcacagcggcattatcgaactgcctgcggatgcgccgattggcaccgatatccgtgaatacctgaaacttgatgacaacaccatcgaaatcagcgtgacgccaaaccgtgccgactgctta                                                                             >  1:432009‑M2/1‑77 (MQ=255)                                                                                                                                                                         aCCGCAGACGATGACCGGCAGGCGGGCGCCGCCGCCATCTCTTTTTCTCCCACGCGGTTTGTGCGCGTGCGTAGGCTGCGCACCCCCACCCCCCACACAAGCGTCCACGCCGCGAGAGGTGCCGACACCAGTTACTCCCCCGACACCTGCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCa                                                                     <  2:1306016/239‑1 (MQ=255)                                                                                                                                                                                     gTCCAGCAGGCGATCGCCGCCGACCTTCACTTTTGTCACACGCAGTTTGTCAGCGTTCggatgctgtgctccttctctgaactgggcatttctgacgatcacagcggcattatcgaactgcctgcggatgcgccgattgtcaccgatatccgtgaatacctgaaacttgatgacaaaaccatcgcaatcagcgtgacgccaaagcgtgccgactgcttcggcatcatttggtttgcgcg                                                         <  2:1275406‑M2/239‑182 (MQ=255)                                                                                                                                                                                              gCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTAttt                                                >  2:1101404/1‑239 (MQ=255)                                                                                                                                                                                                gATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGCGATTTGCTTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTc                                                                                               >  1:1984424/1‑190 (MQ=255)                                                                                                                                                                                                                cACTTTTGTCACACGCAGTTTGTCAGCGTTCggatgctgtgctccttctctgaactgggcatttctgacgatcacagcggcattatcgaactgcctgcggatgcgccgattggcaccgatatccgtgaatacctgaaacttgatgacaacaccatcgaaatcagcgtgacgccaaaccgtgccgactgcttaggcatcattggtgttgcgcgtgacgttgccgtgctgaaccagctgcc                              >  1:1458439‑M2/1‑31 (MQ=255)                                                                                                                                                                                                                             cGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGAGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTAATAATCTATTCCTGCCTTATTTAAACTGTTTGAgg                                   >  1:999677/1‑221 (MQ=255)                                                                                                                                                                                                                                          cGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCa    >  2:955151/1‑239 (MQ=255)                                                                                                                                                                                                                                            ttCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATCGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGCTTCACCCATTCGCGTAACAACAGTTCACTGAATTTCATAATCTATTCCTGCATTATTTAAACGGTTTCAGGAACCGCAGATCGTTTTCGAAGAATGAACGCAgg  >  2:1251689/1‑239 (MQ=255)                                                                                                                                                                                                                                            ttCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAgg  >  1:1790265/1‑239 (MQ=255)                                                                                                                                                                                                                                            ttCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAgg  >  1:63386/1‑239 (MQ=255)                                                                                                                                                                                                                                            ttCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATCCGCGTACCCACAGTTCACTGACTTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGCAACGCAGATCGTTTTCGAAGTATGAACGCAgg  >  2:1230538/1‑239 (MQ=255)                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                             TTCGATAATGCCGCTGTGATCGTCAGAAATGCCCAGTTCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAATGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGACGATGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGG  >  NC_007779/1799251‑1799724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.