mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 37 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | 4477614 = | 169 (1.130) | 3 (0.020) | 3/384 | NT | 1.7% | coding (276/396 nt) | Y75_RS22160 | RidA family protein |
| ? | NC_007779 | 4477988 = | 184 (1.300) | intergenic (‑99/+32) | Y75_RS22160/bdcA | RidA family protein/SDR family oxidoreductase | |||||
| * | ? | NC_007779 | = 4341814 | 170 (1.140) | 4 (0.030) | 4/390 | NT | 2.1% | intergenic (‑105/+32) | adiC/Y75_RS21475 | arginine/agmatine antiporter/DNA‑binding transcriptional activator AdiY |
| ? | NC_007779 | = 4341999 | 210 (1.460) | coding (609/762 nt) | Y75_RS21475 | DNA‑binding transcriptional activator AdiY | |||||
| * | ? | NC_007779 | = 4116265 | 174 (1.170) | 5 (0.040) | 4/384 | NT | 3.2% | coding (1281/2553 nt) | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcA |
| ? | NC_007779 | = 4116474 | 140 (0.990) | coding (1072/2553 nt) | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcA | |||||
| * | ? | NC_007779 | 4051194 = | 123 (0.820) | 4 (0.030) | 3/380 | NT | 2.8% | coding (807/846 nt) | ugpE | sn‑glycerol‑3‑phosphate ABC transporter permease UgpE |
| ? | NC_007779 | 4051992 = | 164 (1.170) | coding (758/1071 nt) | Y75_RS20030 | sn‑glycerol 3‑phosphate ABC transporter ATP binding protein UgpC | |||||
| * | ? | NC_007779 | 3970002 = | 160 (1.070) | 6 (0.040) | 4/392 | NT | 3.6% | coding (822/1650 nt) | treF | alpha,alpha‑trehalase TreF |
| ? | NC_007779 | 3970183 = | 165 (1.140) | coding (641/1650 nt) | treF | alpha,alpha‑trehalase TreF | |||||
| * | ? | NC_007779 | 3966102 = | 135 (0.910) | 6 (0.040) | 4/384 | NT | 4.6% | coding (952/1014 nt) | yhjD | inner membrane protein YhjD |
| ? | NC_007779 | 3966286 = | 120 (0.850) | coding (768/1014 nt) | yhjD | inner membrane protein YhjD | |||||
| * | ? | NC_007779 | = 3943948 | 305 (2.040) | 4 (0.030) | 3/390 | NT | 1.6% | coding (10/1572 nt) | bcsE | cellulose biosynthesis protein BcsE |
| ? | NC_007779 | = 3944292 | 211 (1.470) | coding (63/189 nt) | Y75_RS19560 | hypothetical protein | |||||
| * | ? | NC_007779 | 3915539 = | 365 (2.450) | 3 (0.020) | 3/380 | NT | 1.1% | coding (443/912 nt) | glyQ | glycine‑‑tRNA ligase subunit alpha |
| ? | NC_007779 | 3915873 = | 218 (1.550) | coding (777/912 nt) | glyQ | glycine‑‑tRNA ligase subunit alpha | |||||
| * | ? | NC_007779 | 3898189 = | 271 (1.820) | 6 (0.040) | 5/378 | NT | 1.9% | coding (307/849 nt) | yiaJ | IclR family transcriptional regulator YiaJ |
| ? | NC_007779 | 3898515 = | 361 (2.590) | coding (633/849 nt) | yiaJ | IclR family transcriptional regulator YiaJ | |||||
| * | ? | NC_007779 | = 3893539 | 395 (2.650) | 5 (0.040) | 3/386 | NT | 1.5% | coding (783/987 nt) | yiaO | 2,3‑diketo‑L‑gulonate transporter substrate‑binding protein YiaO |
| ? | NC_007779 | = 3893611 | 301 (2.110) | coding (711/987 nt) | yiaO | 2,3‑diketo‑L‑gulonate transporter substrate‑binding protein YiaO | |||||