New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 398472 =226 (1.200)20 (0.110) 9/382 NT 9.4% coding (86/309 nt) Y75_RS01945 DUF2755 family protein
?NC_007779 398864 = 168 (0.940)coding (48/213 nt) Y75_RS24765 DUF2754 domain‑containing protein

TTGCCATTTTGTGACTCACAACGAAGATTCACGCTTCGGGAATATTCCCAACATCAATTTACCATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/398716‑398472
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctatgcgttCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTATCCGCAGCGTGACGCTCCAGCGCC  >  NC_007779/398864‑399101
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
TTGCCATTTTGTGACTCACAACGAAGATTCACGCTTCGGGAATATTCCCAACATCAATTTACCATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCTCAATGCCTTTTCAACGCCTGGCAACATTGCCT                                                                                                                                                                                                                                                        <  1:1033307/238‑1
  GCCATTTTGTGACTCACAACGAAGATTCACGCTTCGGGAATATTCCCAACATCAATTTACCATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATG                                                                                                                                                                                                                                                     >  2:682176/1‑239
  GCCATTTTGTGACTCACAACGAAGATTCACGCTTCGGGAATATTCCCAACATCAATTTACCATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTAT                                                                                                                                                                                                                                                      >  1:31990/1‑238
  GCCATTTTGTGACTCACAACGAAGATTCACGCTTCGGGAATATTCCCAACATCAATTTACCATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTAT                                                                                                                                                                                                                                                      >  1:898332/1‑238
  GCCATTTTGTGACTCACAACGAAGATTCACGCTTCGGGAATATTCCCAACATCAATTTACCATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTAT                                                                                                                                                                                                                                                      >  1:1502103/1‑238
  GCCATTTTGTGACTCACAACGAAGATTCACGCTTCGGGAATATTCCCAACATCAATCTACCATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTAT                                                                                                                                                                                                                                                      >  1:1854669/1‑238
    CATTTTGTGACTCACAACGACGATTCACGGTTCGGGAATATTCCAAACATCAATTTAACATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGTCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCGTCTTCAACGCCTGGCAACATTGCCTATGC                                                                                                                                                                                                                                                    <  1:2114724/238‑1
    CATTTTGTGACTCACAACGAAGATTCACGCTTCGGGAATATTCCCAACATCAATTTACCATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGC                                                                                                                                                                                                                                                    <  2:1866471/238‑1
    CATTTTGTGACTCACAACGAAGATTCACGCTTCGGGAATATTCCCAACATCAATTTACCATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGC                                                                                                                                                                                                                                                    <  1:126627/238‑1
                                                    ATCAATTTACCATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGC                                                                                                                                                                                                                                                    >  2:1198381/1‑190
                                                    ATCAATTTACCATGATTCTGAGATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTTATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGC                                                                                                                                                                                                                                                    <  1:1198381/190‑1
                                                               ATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGC                                                                                                                                                                                        <  2:2191104/239‑1
                                                                             GACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGT                                                                                                                                                                                                                                                  >  1:443448/1‑167
                                                                             GACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGT                                                                                                                                                                                                                                                  <  2:443448/167‑1
                                                                                  TCTAAATGACCTGTCAGACTTGCCATACGCAGCTGGTATCACACCAGAAGAGCAGCAGATGACTTCCGGAGTTTTTTATGGCTGATTTAACCCTGTCAAAATCGCTGTTTAGCGGAAAATTTCTCAATGCCTCTCCAACGCCTGGCAACATTGCCGATGCGTTCGCCATTGGCCTTATATTGCTTATTAATGTCGTGGTGGGGTTGCTGGGATTTGAAGCAAAAGGTTGGCAGACCTAT                                                                                                                                                                     >  1:2171527/1‑239
                                                                                  TCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGGAGCAAAAGGTTGGCAGACCTAT                                                                                                                                                                     >  1:791796/1‑239
                                                                                  TCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTTGCAGACCTAT                                                                                                                                                                     >  2:857073/1‑239
                                                                                  TCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTAT                                                                                                                                                                     >  1:1139426/1‑239
                                                                                  TCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTAT                                                                                                                                                                     >  1:652920/1‑239
                                                                                  TCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTAT                                                                                                                                                                     >  1:1253671/1‑239
                                                                                  TCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGC                                                                                                                                                                                        >  2:2041439/1‑220
                                                                                  TCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGC                                                                                                                                                                                        <  1:2041439/220‑1
                                                                                  TCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGGTACTGGGGTTTGAAGCCAAAGGTTGGCAGAACTtt                                                                                                                                                                     >  2:1541932/1‑237
                                                                                  TCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCT                                                                                                                                                                                                                         <  2:486360/187‑1
                                                                                  TCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCT                                                                                                                                                                                                                         >  1:486360/1‑187
                                                                                  TCTAAATGACCTGTCAGACTTGCCATAAGCCGATGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTAT                                                                                                                                                                     >  1:1751054/1‑239
                                                                                                    CTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAGAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACG                                                                                                                                                   <  2:652920/239‑1
                                                                                                    CTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACG                                                                                                                                                   <  2:791796/239‑1
                                                                                                           TAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGA                                                                                                                                            <  2:2171527/239‑1
                                                                                                                                                          TTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAG                                                                                               <  1:1541932/237‑1
                                                                                                                                                                           ACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATA                                                                            <  2:1751054/239‑1
                                                                                                                                                                              CTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGA                                                                         <  1:857073/239‑1
                                                                                                                                                                                                                           ACGCCTGGCAACATTGCCTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTT                           <  2:1139426/239‑1
                                                                                                                                                                                                                                            CTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGAATATTATCGGGCGT                                                          <  1:1412918/191‑1
                                                                                                                                                                                                                                            CTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGA                                                                         <  2:1881072/177‑1
                                                                                                                                                                                                                                            CTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGA                                                                         >  1:1881072/1‑177
                                                                                                                                                                                                                                            CTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGT                                                                                                                                                                >  2:1100621/1‑90
                                                                                                                                                                                                                                            CTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGT                                                                                                                                                                <  1:1100621/90‑1
                                                                                                                                                                                                                                              ATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGGTGGTTATTCGTTGTCGCGGTGAAGAAACTGAAAACGCCCCATAAGAATATTATCGGGGGTTAAAATATTTAAATGTGGGTTTTAAAGCGGTATTCGCAGCGTTACcgct         >  2:700211/1‑234
                                                                                                                                                                                                                                               TGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTATCCGCAGCGTGACGCTCCA       >  1:1149123/1‑239
                                                                                                                                                                                                                                                    TCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTATCCGCAGCGTGACGCTCCAGCGCC  >  1:972857/1‑239
                                                                                                                                                                                                                                                    TCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTATCCGCAGCGTGACGCTCCAGCGC   >  1:904709/1‑238
                                                                                                                                                                                                                                                    TCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTATCCGCAGCGTGACGCTCCAGCGC   <  1:747822/238‑1
                                                                                                                                                                                                                                                    TCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGAATATTATCGGGCGT                                                          >  1:504205/1‑183
                                                                                                                                                                                                                                                    TCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGAATATTATCGGGCGT                                                          <  2:504205/183‑1
                                                                                                                                                                                                                                                    TCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACG                                                                                   >  1:1087117/1‑159
                                                                                                                                                                                                                                                    TCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACG                                                                                   <  2:1087117/159‑1
                                                                                                                                                                                                                                                    TCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGGTGGTTATTCGGCGTCGCGGTGAAGAAAATGAAAACGCCCAATAAGGAAATTt                                                                   >  2:2211999/1‑174
                                                                                                                                                                                                                                                    TCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGGTGGGTTTTTTTCGTCGCGATGAAGAAACTGAAAACGCCCCATAAGAATATTTTCGGGCGTTAAAATATTAAATTGTGGGTTTTAATGCGTTATCCGCAACGTGACCCTCCCGCGC   >  2:1544716/1‑238
                                                                                                                                                                                                                                                    TCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGGTGATTATTCGTCGTCGCGGTGAAGAAACTGAAAAAGCCCAATAAGAATATTTACGGGCGTTAAAAAATTACATTGTGGTTTTCAATGCGTTATCCGCAGCGTGAacgtcccgcgc   >  2:1212634/1‑227
                                                                                                                                                                                                                                                    TCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGGTGATTATTCGTCGTCGCGATGAAAAAACTGAAAACGTCCAATAAGAATATTTTCGGGCGCTAAAAAAATTAAATTTGGTTTTTAAAGCGTTATTCGCCACGTGAAGCccataccc   >  2:399491/1‑230
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
TTGCCATTTTGTGACTCACAACGAAGATTCACGCTTCGGGAATATTCCCAACATCAATTTACCATGATTCTGATATTGACAATCTAAATGACCTGTCAGACTTGCCATAAGCCGCTGGTATCACACCAGAAGAGAAGCAGATGACTTCCGGAGGTTTTTATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/398716‑398472
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctatgcgttCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTATCCGCAGCGTGACGCTCCAGCGCC  >  NC_007779/398864‑399101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.