mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 385 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 4644491 | 211 (1.120) | 7 (0.040) | 7/378 | NT | 3.2% | coding (496/717 nt) | arcA | two‑component system response regulator ArcA |
| ? | NC_007779 | = 4644872 | 229 (1.290) | coding (115/717 nt) | arcA | two‑component system response regulator ArcA | |||||
| * | ? | NC_007779 | 4641935 = | 144 (0.770) | 3 (0.020) | 3/384 | NT | 1.8% | coding (560/1425 nt) | creC | two‑component system sensor histidine kinase CreC |
| ? | NC_007779 | 4642493 = | 190 (1.060) | coding (1118/1425 nt) | creC | two‑component system sensor histidine kinase CreC | |||||
| * | ? | NC_007779 | 4636688 = | 203 (1.080) | 3 (0.020) | 3/382 | NT | 1.5% | coding (1276/1938 nt) | sltY | murein transglycosylase |
| ? | NC_007779 | 4637252 = | 198 (1.110) | coding (1840/1938 nt) | sltY | murein transglycosylase | |||||
| * | ? | NC_007779 | 4613938 = | 114 (0.610) | 4 (0.020) | 4/378 | NT | 3.4% | coding (613/678 nt) | yjjG | pyrimidine 5'‑nucleotidase |
| ? | NC_007779 | 4614072 = | 120 (0.680) | intergenic (+69/‑22) | yjjG/prfC | pyrimidine 5'‑nucleotidase/peptide chain release factor 3 | |||||
| * | ? | NC_007779 | = 4574136 | 273 (1.460) | 3 (0.020) | 3/392 | NT | 1.3% | pseudogene (459/921 nt) | Y75_RS25100 | Rpn family recombination‑promoting nuclease/putative transposase |
| ? | NC_007779 | = 4574763 | 179 (0.970) | intergenic (+165/+79) | Y75_RS25100/Y75_RS22690 | Rpn family recombination‑promoting nuclease/putative transposase/PLP‑dependent aminotransferase family protein | |||||
| * | ? | NC_007779 | = 4571140 | 168 (0.900) | 4 (0.020) | 4/390 | NT | 2.0% | coding (787/1281 nt) | Y75_RS22675 | DUF445 domain‑containing protein |
| ? | NC_007779 | = 4571221 | 222 (1.210) | coding (706/1281 nt) | Y75_RS22675 | DUF445 domain‑containing protein | |||||
| * | ? | NC_007779 | = 4555830 | 172 (0.920) | 4 (0.020) | 3/386 | NT | 2.0% | coding (147/1344 nt) | gntP | gluconate permease GntP |
| ? | NC_007779 | = 4556404 | 228 (1.260) | coding (89/1185 nt) | uxuA | mannonate dehydratase | |||||
| * | ? | NC_007779 | 4552337 = | 103 (0.550) | 4 (0.020) | 4/378 | NT | 2.3% | coding (2562/2637 nt) | fimD | fimbrial biogenesis usher protein FimD |
| ? | NC_007779 | 4552893 = | 245 (1.380) | coding (472/531 nt) | fimF | type 1 fimbria minor subunit FimF | |||||
| * | ? | NC_007779 | 4550104 = | 149 (0.790) | 3 (0.020) | 3/382 | NT | 1.8% | coding (329/2637 nt) | fimD | fimbrial biogenesis usher protein FimD |
| ? | NC_007779 | 4550287 = | 189 (1.060) | coding (512/2637 nt) | fimD | fimbrial biogenesis usher protein FimD | |||||
| * | ? | NC_007779 | 4540051 = | 151 (0.800) | 6 (0.030) | 6/392 | NT | 2.2% | coding (327/987 nt) | Y75_RS22495 | hypothetical protein |
| ? | NC_007779 | 4540548 = | 379 (2.060) | coding (824/987 nt) | Y75_RS22495 | hypothetical protein | |||||