New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_007779 | 228016 = | NA (NA) | 6 (0.040) | 6/410 | NT | NA | noncoding (2267/2930 nt) | Y75_RS01035 | 23S ribosomal RNA |
? | NC_007779 | 228041 = | NA (NA) | noncoding (2292/2930 nt) | Y75_RS01035 | 23S ribosomal RNA |
TTGAGCCTTGATGTGTAGGATAGGTGGGAGGCTTTGAAGTGTGGACGCCAGTCTGCATGGAGCCGACCTTGAAATACCACCCTTTAATGTTTGATGTTCTAACGTTGACCCGTAATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGG > NC_007779/227856‑228155 | ttgggacTTGATGTGTAGGATAGGTTGGGGGCTTTGAAGTGTGGACGCCAGTCTGCATGGAGCCGACCTTGAAATACCACCCTTTAATGTTTGATGTTCTAACGTTGACCCGTAATCCGGGTTGCGGACAGGGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATag < 2:415356/233‑2 (MQ=0) gttgACGCCAGTCTGCATGGGGCCGACCGTGAAATACCTCCCTTTAAGGTTTGATGTTCTAACGTTGACCCGTAATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTGACGGAGGAGCACGAAGGTTGGCGAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCGAGCTTGACTGCGAGCGTGACGTCGCGAGCAGGTGCGa < 2:778066/236‑1 (MQ=1) cgcccTTGAAATACCACCCTGTAATGTTTGATGTTGTAACGTTGACCCGTAATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGTGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTAGCTAATCCTGGTCGGACGGCAGGAGGTTAGTGCAATGGCATAAGCCCGCGTGACTGCGAGCGTGGCGGCGCGAGCAGCTGAGAAAGCAGGTCATCGTGTTCCgg < 2:443031/234‑1 (MQ=1) | TTGAGCCTTGATGTGTAGGATAGGTGGGAGGCTTTGAAGTGTGGACGCCAGTCTGCATGGAGCCGACCTTGAAATACCACCCTTTAATGTTTGATGTTCTAACGTTGACCCGTAATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGG > NC_007779/227856‑228155 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |