New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 228016 =NA (NA)6 (0.040) 6/410 NT NA noncoding (2267/2930 nt) Y75_RS01035 23S ribosomal RNA
?NC_007779 228041 = NA (NA)noncoding (2292/2930 nt) Y75_RS01035 23S ribosomal RNA

TTGAGCCTTGATGTGTAGGATAGGTGGGAGGCTTTGAAGTGTGGACGCCAGTCTGCATGGAGCCGACCTTGAAATACCACCCTTTAATGTTTGATGTTCTAACGTTGACCCGTAATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGG  >  NC_007779/227856‑228155
                                                                                                                                                                                         |                                                                                                                  
ttgggacTTGATGTGTAGGATAGGTTGGGGGCTTTGAAGTGTGGACGCCAGTCTGCATGGAGCCGACCTTGAAATACCACCCTTTAATGTTTGATGTTCTAACGTTGACCCGTAATCCGGGTTGCGGACAGGGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATag                                                               <  2:415356/233‑2 (MQ=0)
                                        gttgACGCCAGTCTGCATGGGGCCGACCGTGAAATACCTCCCTTTAAGGTTTGATGTTCTAACGTTGACCCGTAATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTGACGGAGGAGCACGAAGGTTGGCGAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCGAGCTTGACTGCGAGCGTGACGTCGCGAGCAGGTGCGa                       <  2:778066/236‑1 (MQ=1)
                                                               cgcccTTGAAATACCACCCTGTAATGTTTGATGTTGTAACGTTGACCCGTAATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGTGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTAGCTAATCCTGGTCGGACGGCAGGAGGTTAGTGCAATGGCATAAGCCCGCGTGACTGCGAGCGTGGCGGCGCGAGCAGCTGAGAAAGCAGGTCATCGTGTTCCgg  <  2:443031/234‑1 (MQ=1)
                                                                                                                                                                                         |                                                                                                                  
TTGAGCCTTGATGTGTAGGATAGGTGGGAGGCTTTGAAGTGTGGACGCCAGTCTGCATGGAGCCGACCTTGAAATACCACCCTTTAATGTTTGATGTTCTAACGTTGACCCGTAATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGG  >  NC_007779/227856‑228155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.