BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	3419810 =	114 (0.700)	8 (0.050)	4/408	NT	7.2%	pseudogene (914/1025 nt)	Y75_RS16995	amino acid ABC transporter substrate‑binding protein
*	?	NC_007779	3419983 =	97 (0.620)	8 (0.050)	4/408	NT	7.2%	intergenic (+62/‑6)	Y75_RS16995/Y75_RS17000	amino acid ABC transporter substrate‑binding protein/amino acid ABC transporter permease

Only 100 of 140 total aligned reads displayed.

CTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCTTCAGCGTTATGCTTTCCGAGGTTTCTATGTCTCATCGCCG‑CTCAACCGTTAAAGGCTCACTCTCTTTTGCCAACCCTACGGT  >  NC_007779/3419574‑3420044

cTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTc                                                                                                                                                                                                                                            >  1:1502699/1‑239 (MQ=255)

cTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTc                                                                                                                                                                                                                                            >  2:189328/1‑239 (MQ=255)

cTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGGAACTACTc                                                                                                                                                                                                                                            >  2:881256/1‑239 (MQ=255)

  caataaaaacgcgtccgtaggtgtcgccctgctggtaatcgatcaaatgctggacaataccgaagccagcgccgcgatccagaaaggcaaaacctgaagtaatgccacgattattgagattcgttacagtgttgtgaaataaccaaccaacaatgccgacaacagcaacaACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCgg                                                                                                                                                                                                                                          <  1:702936‑M1/69‑1 (MQ=255)

   tgctggtaatcgatcaaatgctggacaataccgaagccagcgccgcgatccagaaaggcaaaacctgaagtaatgccacgattattgagattcgttacagtgttgtgaaataaccaaccaacaatgccgacaacagcaacaacggcaaggatctggaataaccaggcgcgaaccgtagggttggcaaaagagagtgagcctttaacggttgagcggcgatgagacatagaaacCTCGGa                                                                                                                                                                                                                                         >  1:1623175‑M1/234‑239 (MQ=255)

   tgctggtaatcgatcaaatgctggacaataccgaagccagcgccgcgatccagaaaggcaaaacctgaagtaatgccacgattattgagattcgttacagtgttgtgaaataaccaaccaacaatgccgacaacagcaacaacggcaaggatctggaataaccaggcgcgaaccgtagggttggcaaaagagagtgagcctttaacggttgagcggcgataagacatagaaacCTCGGa                                                                                                                                                                                                                                         >  2:488600‑M1/234‑239 (MQ=255)

    gctggtaatcgatcaaatgctggacaataccgaagccagcgccgcgatccagaaaggcaaaacctgaagtaatgccacgattattgagattcgttacagtgttgtgaaataaccaaccaacaatgccgacaacagcaacaacggcaaggatctggaataaccaggcgcgaaccgtagggttggcaaaagagagtgagcctttaacggttgagcggcgatgagacatagaaacCTCGGaa                                                                                                                                                                                                                                        <  1:809210‑M1/7‑1 (MQ=255)

     ctggtaatcgatcaaatgctggacaataccgaagccagcgccgcgatccagaaaggcaaaacctgaagtaatgccacgattattgagattcgttacagtgttgtgaaataaccaaccaacaatgccgacaacagcaacaacggcaaggatctggaataaccaggcgcgaaccgtagggttggcaaaagagagtgagcctttaacggttgagcggcgatgagacatagaaacCTCGGaaa                                                                                                                                                                                                                                       <  1:1727016‑M1/8‑1 (MQ=255)

     ctggtaatcgatcaaatgctggacaataccgaagccagcgccgcgatccagaaaggcaaaacctgaagtaatgccacgattattgagattcgttacagtgttgtgaaataaccaaccaacaatgccgacaacagcaacaacggcaaggatctggaataaccaggcgcgaaccgtagggttggcaaaagagagtgagcctttaacggttgagcggcgatgagacatagaaacCTCGGaaa                                                                                                                                                                                                                                       <  2:1761045‑M1/8‑1 (MQ=255)

        ggTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAAttt                                                                                                                                                                                                                                    >  1:1332321/1‑239 (MQ=255)

           aGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAAttttt                                                                                                                                                                                                                                  <  1:741028/238‑1 (MQ=255)

              tcgtcgTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGc                                                                                                                                                                                                                              <  1:69836/239‑1 (MQ=255)

               cgtcgtGGCGATGATGAATGGTTCTCGATTGTACGTTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCg                                                                                                                                                                                                                             >  2:302496/1‑239 (MQ=255)

               cgtcgtGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCg                                                                                                                                                                                                                             >  1:814061/1‑239 (MQ=255)

               cgtcgtGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCg                                                                                                                                                                                                                             >  2:807819/1‑239 (MQ=255)

               cgacgtGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCAAGAACGACGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAGAGAAGGCGATTACTGCAAGGATCTGAAGCTGGAAAATAAAAGGGGCTATAAGATCATCAAACAGGAGGGTCACTATACGGAAATTTTTGTGCg                                                                                                                                                                                                                             >  2:576683/4‑239 (MQ=255)

                     ggCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACg                                                                                                                                                                                                                        <  2:767570/238‑1 (MQ=255)

                     ggCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTCGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGt                                                                                                                                                                                                                       <  1:595708/239‑1 (MQ=255)

                     ggCGATGATGAATAGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATTGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACg                                                                                                                                                                                                                        <  2:1436923/238‑1 (MQ=255)

                                      ctcGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGccc                                                                                                                                                                                                        >  1:1534713/1‑237 (MQ=255)

                                      ctcGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTCCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGTTTCAGAAAGccc                                                                                                                                                                                                        >  1:1348685/1‑237 (MQ=255)

                                        tcgatcaaatgctggacaataccgaagccagcgccgcgatccagaaaggcaaaacctgaagtaatgccacgattattgagattcgttacagtgttgtgaaataaccaaccaacaatgccgacaacagcaacaACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTg                                                                                                                                                                                                    >  2:890804‑M1/133‑239 (MQ=255)

                                        cGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTTAGAAAGCCCGCTg                                                                                                                                                                                                    <  2:1207753/239‑1 (MQ=255)

                                        cGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTg                                                                                                                                                                                                    <  2:1348685/239‑1 (MQ=255)

                                         gATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAACTGGGCCTATAACATCATCAAACAGGTGGGTAAATACTCGGAAATTTTTGAGCGTAACGTAGGGTCAGAAAGACCGCTGa                                                                                                                                                                                                   >  2:1545429/1‑239 (MQ=255)

                                              tACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAAtt                                                                                                                                                                                              >  1:936967/1‑239 (MQ=255)

                                              tACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAAtt                                                                                                                                                                                              >  1:1044885/1‑239 (MQ=255)

                                              tACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAAtt                                                                                                                                                                                              >  1:1850972/1‑239 (MQ=255)

                                              aaatgctggacaataccgaagccagcgccgcgatccagaaaggcaaaacctgaagtaatgccacgattattgagattcgttacagtgttgtgaaataaccaaccaacaatgccgacaacagcaacaACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAAtt                                                                                                                                                                                              <  1:223034‑M1/113‑1 (MQ=255)

                                                   tagACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAAc                                                                                                                                                                                          <  2:587180/236‑1 (MQ=255)

                                                   tGGACTCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAGGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAACTGGGCCTATAACATCAACAAACAGCTGGGTAAATACTCGGAAACTTTTGAGCGTCACGTAGGTTCAGCAAGCCCGCTGAAGATTATACg                                                                                                                                                                                         >  2:1109381/1‑239 (MQ=255)

                                                   tGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACg                                                                                                                                                                                         >  1:1065202/1‑239 (MQ=255)

                                                   tGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGACTAATCCATCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAAc                                                                                                                                                                                          <  1:138580/238‑1 (MQ=255)

                                                     gACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACg                                                                                                                                                                                                                        <  2:403242/206‑1 (MQ=255)

                                                     gACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACg                                                                                                                                                                                                                        >  1:403242/1‑206 (MQ=255)

                                                     gACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTg                                                                                                                                                                                       >  2:1453393/1‑239 (MQ=255)

                                                       gaaaggcaaaacctgaagtaatgccacgattattgagattcgttacagtgttgtgaaataaccaaccaacaatgccgacaacagcaacaacggcaaggatctggaataaccaggcgcgaaccgtagggttggcaaaagagagtgagcctttaacggttgagcggcgatgagacatagaaacCTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTgg                                                                                                                                                                                      <  1:1689563‑M1/57‑1 (MQ=255)

                                                       cGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTgg                                                                                                                                                                                      <  2:1295112/238‑1 (MQ=255)

                                                          gaaaggcaaaacctgaagtaatgccacgattattgagattcgttacagtgttgtgaaataaccaaccaacaatgccgacaacagcaacaacggcaaggatctggaataaccaggcgcgaaccgtagggttggcaaaagagagtgagcctataacatcatcaaacaggtgggtaactac‑TCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCaaa                                                                                                                                                                                 <  1:556689‑M1/61‑1 (MQ=255)

                                                             tCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAaat                                                                                                                                                                               >  1:996621/1‑239 (MQ=255)

                                                              cGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAaata                                                                                                                                                                              <  1:1624048/239‑1 (MQ=255)

                                                               gCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAaataa                                                                                                                                                                             >  1:716632/1‑239 (MQ=255)

                                                                   tgctgaatgctgaaGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAAtctc                                                                                                                                                                         <  1:430966/239‑1 (MQ=255)

                                                                          aatgccacgattattgagattcgttacagtgttgtgaaataaccaaccaacaatgccgacaacagcaacaacggcaaggatctggaataaccaggcgcgaaccgtagggttggcaaaagagagtgagcctttaacggttgagcggcgatgagacatagaaacCTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATa                                                                                                                                                                  <  1:1601196‑M1/77‑1 (MQ=255)

                                                                                agagATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAAcggcg                                                                                                                                                            <  2:1224143/239‑1 (MQ=255)

                                                                                agagATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAAcggcg                                                                                                                                                            <  1:12928/239‑1 (MQ=255)

                                                                                  agaTGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGt                                                                                                                                                          >  2:195989/1‑239 (MQ=255)

                                                                                   gaTGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGt                                                                                                                                                          <  2:794321/238‑1 (MQ=255)

                                                                                    aTGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAAc                                                                                                                                                                                          <  2:1698740/205‑1 (MQ=255)

                                                                                    aTGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAAc                                                                                                                                                                                          >  1:1698740/1‑205 (MQ=255)

                                                                                      gggCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTc                                                                                                                                                      <  2:1661168/239‑1 (MQ=255)

                                                                                            cAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACg                                                                                                                                                <  1:1443999/239‑1 (MQ=255)

                                                                                              aTTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAAcggcg                                                                                                                                                            >  1:763671/1‑225 (MQ=255)

                                                                                              aTTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAAcggcg                                                                                                                                                            <  2:763671/225‑1 (MQ=255)

                                                                                                 cccAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAAcggcg                                                                                                                                                            >  2:203583/1‑222 (MQ=255)

                                                                                                 cccAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAAcggcg                                                                                                                                                            <  1:546000/222‑1 (MQ=255)

                                                                                                 cccAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAAcggcg                                                                                                                                                            <  1:203583/222‑1 (MQ=255)

                                                                                                  ccAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCg                                                                                                                                           >  1:1521353/1‑238 (MQ=255)

                                                                                                   cAGAAAGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGACACATCTGCTGGGTAAAGAAAGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAAACTCTGGAATAACGGCGGTATTCAGTACGCACCGcc                                                                                                                                         <  2:1253978/239‑1 (MQ=255)

                                                                                                         gTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATaa                                                                                                                                                                 >  2:151345/1‑209 (MQ=255)

                                                                                                         gTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATaa                                                                                                                                                                 <  1:151345/209‑1 (MQ=255)

                                                                                                               gAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGt                                                                                                                             <  1:1070193/239‑1 (MQ=255)

                                                                                                               gAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGt                                                                                                                             <  1:732172/239‑1 (MQ=255)

                                                                                                                aaaaaGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGt                                                                                                                             <  2:78516/238‑1 (MQ=255)

                                                                                                                   aaGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGgt                                                                                                                         <  2:1502699/239‑1 (MQ=255)

                                                                                                                        gCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTg                                                                                                                                                                                                    <  2:1515068/159‑1 (MQ=255)

                                                                                                                                 gCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCg                                                                                                                                   <  1:583140/215‑1 (MQ=255)

                                                                                                                                   aaCGCCTGATATGGTACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAg                                                                                                            <  1:611975/236‑1 (MQ=255)

                                                                                                                                      aacagcaacaacggcaaggatctggaataaccaggcgcgaaccgtagggttggcaaaagagagtgagcctttaacggttgagcggcgatgagacatagaaacCTCGGAAA‑‑‑‑‑‑‑GCATAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTAcggcg                                                                                               >  1:763635‑M1/103‑239 (MQ=255)

                                                                                                                                      aacagcaacaacggcaaggatctggaataaccaggcgcgaaccgtagggttggcaaaagagagtgagcctttaacggttgagcggcgatgagacatagaaacCTCGGAAA‑‑‑‑‑‑‑GCATAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTAcggcg                                                                                               >  1:1170898‑M1/103‑239 (MQ=255)

                                                                                                                                             atGGTACATTGGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTGACTACTCGGAAATTTTTGAGCGTAACGTACGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATATTCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCTCTAcggcg                                                                                               <  2:814061/239‑1 (MQ=255)

                                                                                                                                             atGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTAcggcg                                                                                               <  2:1331649/239‑1 (MQ=255)

                                                                                                                                             atGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTAcggcg                                                                                               <  1:195989/239‑1 (MQ=255)

                                                                                                                                                 cacaTCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTTAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGgcggcg                                                                                            >  1:1410856/1‑238 (MQ=255)

                                                                                                                                                     tCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAAttttt                                                                                                                                                                                                                                  <  2:761895/100‑1 (MQ=255)

                                                                                                                                                      ctgctgGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCCTGCGTTAAGTCGGGGGGAGGGAACGAACGTCGCTACGGCGGCG‑ctccct                                                                                     >  2:809210/1‑239 (MQ=255)

                                                                                                                                                         atctggaataaccaggcgcgaaccgtagggttggcaaaagagagtgagcctttaacggttgagcggcgatgagacatagaaacCTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCtt                                                                                    >  2:1601196‑M1/84‑237 (MQ=255)

                                                                                                                                                         atctggaataaccaggcgcgaaccgtagggttggcaaaagagagtgagcctttaacggttgagcggcgatgagacatagaaacCTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCtt                                                                                    >  2:1689563‑M1/84‑237 (MQ=255)

                                                                                                                                                           gggTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGCACGCAACGCCCCTGCGTTAAGTCGGTGTGAGGGAAACAGCGTCGCCACGGCGGCG‑CTCTCATCCGc                                                                                >  1:1267882/1‑239 (MQ=255)

                                                                                                                                                            ggTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCtt                                                                                    <  1:969073/234‑1 (MQ=255)

                                                                                                                                                               aaaGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCTTCAGCGtt                                                                             <  1:1166537/238‑1 (MQ=255)

                                                                                                                                                                   aagGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGGAAAGAGCGTCGCTACGGCGGGG‑CGCTCTTTCGCGGTTTGCt                                                                        >  1:384049/1‑239 (MQ=255)

                                                                                                                                                                      gCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCCGTACGCACCGCCCGTGCGGTTAGTCGGTGGGAGGGAACGAGCGTCGCTACGGCGGCG‑TCCTCTTCAGCGCTTTGtttt                                                                      >  1:1488821/1‑238 (MQ=255)

                                                                                                                                                                          ttACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCTTCAGCGTTATGCTTTCCGAg                                                                 <  2:1385443/239‑1 (MQ=255)

                                                                                                                                                                          ttACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCTTCAGCGTTATGCTTTCCGAg                                                                 <  1:304992/239‑1 (MQ=255)

                                                                                                                                                                              GGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCTTCAGCGTTATGCTTTCCGAGGttt                                                             >  1:1154543‑M1/1‑239 (MQ=255)

                                                                                                                                                                                              tGGATAATAAATGGGCCTAGAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTTGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCTTCAGCGTTATGCTTTCCGAGGTTTCTATGTCTCATcgccg                                             <  2:405992/239‑1 (MQ=255)

                                                                                                                                                                                               ggATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGGATTCAGTACGCACCGCCCCCGCGTTAAGTCGGTGTGGGGGGAAGAGCGTCGCCACGGCGGCGCCCCCCTTCACGGTTTTGTTTTCGGAGGTTT‑TTTGTTTCCTcgccc                                             >  2:1025420/1‑237 (MQ=255)

                                                                                                                                                                                                 ataataAAGGGGCCTATAACATCATCAATCAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCGCTGGAATAACGGCTGTATTCAGTACGCACCGCCCTTGCGTTAAGTCGGTGTGAGTTAACGAGCGTCGCTACGGCGGCG‑CTCTCTTCAGCGTTATGCTTTCCGAGGTTTCTATGTCTCATCGCCG‑Ct                                          <  2:1823781/238‑1 (MQ=255)

                                                                                                                                                                                                   aataaATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCTTCAGCGTTATGCTTTCCGAGGTTTCTATGTCTCATCGCCG‑CTCaa                                       <  2:1410856/239‑1 (MQ=255)

                                                                                                                                                                                                     taaATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAgg                                                                                                                             >  1:1275847/1‑152 (MQ=255)

                                                                                                                                                                                                     taaATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGt                                                                                                                             <  2:1275847/153‑1 (MQ=255)

                                                                                                                                                                                                         tGGGCCTGTAACATCATTAAACATGGTGGTAACTACTCGGAAATTTTTGATCGTAACGTAGGTTCAGAAAGCCCGCCGCGAATGATGCGTGGGCAAAATAATCTCCGGGATAACGGCGGTATTCAGTCCGCACCGCCCGTTAGTTAAGTCGGTGTGAGGTAACGAGCGTCGCGACGGCGGTG‑CTCTCTTCAGCGTTATGCTTTCCGAGGTTTCTATGTCTCATCGCCG‑GTCTACCGATa                                 <  2:230585/239‑1 (MQ=255)

                                                                                                                                                                                                           ggCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGGATTCAGTACGCACCGCCCGTGCGGTAAAGCGGGGTGAGGGAAAGAGCGGCGCTAAGGCGGCG‑CTCTCTTCAGCGGTATGCTTTTCGCGGGTTCTATGTCTCAACGCCG‑CCCAACCCTTaaa                               >  1:303210/1‑239 (MQ=255)

                                                                                                                                                                                                            gCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCTTCAGCGTTATGCTTTCCGAGGTTTCTATGTCTCATCGCCG‑CTCAACCGTTaaa                               <  1:147678/238‑1 (MQ=255)

                                                                                                                                                                                                                 taACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTTAGTACGCACCGCCCGTGCGTTAAGTCGGGGTGAGGGAACGAGGGTCGCCACGGCGGCG‑CCCTCTTCAGCGGTATGCTTTTCGCGGGTTCTTTTTCTCATCGCCGCCCCAACGTTTAAAggtc                           >  1:1010157/1‑236 (MQ=255)

                                                                                                                                                                                                                            aaCAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCTTCAGCGTTATGCTTTCCGAGGTTTCTATGTCTCATCGCCG‑CTCAACCGTTAAAGGCTCACTCTCTTTTGc              <  1:1849815/239‑1 (MQ=255)

                                                                                                                                                                                                                                 gTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTggg                                                                                                                                                                                     >  2:1033475/1‑69 (MQ=255)

                                                                                                                                                                                                                                 gTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTggg                                                                                                                                                                                     <  1:1033475/69‑1 (MQ=255)

                                                                                                                                                                                                                                     gTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCTTCAGCGTTATGCTTTCCGAGGTTTCTATGTCTCATCGCCG‑CTCAACCGTTAAAGGCTCACTCTCTTTTGc              <  1:868374/230‑1 (MQ=255)

CTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAAGTCGGTGTGAGGTAACGAGCGTCGCTACGGCGGCG‑CTCTCTTCAGCGTTATGCTTTCCGAGGTTTCTATGTCTCATCGCCG‑CTCAACCGTTAAAGGCTCACTCTCTTTTGCCAACCCTACGGT  >  NC_007779/3419574‑3420044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.