New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? BX571857 980997 =NA (NA)18 (0.310) 17/118 NT NA noncoding (1/27 nt) Repeat flanking prophage phiSa4(476) Repeat flanking prophage phiSa4(476)
?BX571857 = 1025750 NA (NA)intergenic (+519/‑57) SAS0954/SAS0955 amidase/putative protease

CTTATATACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  BX571857/981119‑980997
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatcattatgacacattaacacctaatGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCACTCGTGTT  <  BX571857/1025750‑1025655
                                                                                                                                                                                                                           
CTTATATACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGTACACCTTGAAAACACTGTAATTATTGCGTTATCTGT                                                                                                                            <  2:989143/97‑1
CTTATATACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGT                                                                                                                            <  1:609720/97‑1
 TTATATACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTA                                                                                                                           >  1:1063832/1‑97
 TTATATACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTA                                                                                                                           >  1:145513/1‑97
  TATATACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTAT                                                                                                                          <  1:1159539/97‑1
  TATATACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTAT                                                                                                                          <  2:1417080/97‑1
  TATATACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTAT                                                                                                                          <  2:1127635/97‑1
   ATATACTAAGAGCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATC                                                                                                                         <  1:875891/97‑1
    TATACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCA                                                                                                                        <  2:879995/97‑1
      TACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATT                                                                                                                      >  1:293172/1‑97
       ACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTA                                                                                                                     <  1:18190/97‑1
       ACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTA                                                                                                                     >  2:144454/1‑97
        CTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTAT                                                                                                                    <  2:903276/97‑1
        CTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTAT                                                                                                                    >  2:615233/1‑97
        CTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTAT                                                                                                                    >  1:1063292/1‑97
          AAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGA                                                                                                                  >  1:19110/1‑97
           AAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGAC                                                                                                                 >  2:34924/1‑97
           AAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGAC                                                                                                                 >  1:859570/1‑97
            AATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACA                                                                                                                <  1:1238104/97‑1
             ATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACAC                                                                                                               <  2:398588/97‑1
             ATCCATCTGCCCTTTTTATGCCCTTTTATACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACAC                                                                                                               <  2:1295097/97‑1
              TCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACA                                                                                                              >  1:533051/1‑97
              TCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACA                                                                                                              <  2:1339658/97‑1
               CCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACAT                                                                                                             >  2:682977/1‑97
               CCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACAT                                                                                                             >  2:1126768/1‑97
               CCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACAT                                                                                                             >  1:426545/1‑97
                CATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATT                                                                                                            <  2:661713/97‑1
                 ATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTA                                                                                                           <  1:1358595/97‑1
                   CTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAAC                                                                                                         <  1:1163368/97‑1
                      CCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTCAGCCGTTATCTGTATCATTATGACACATTAACACC                                                                                                      >  1:732405/1‑97
                       CCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCT                                                                                                     <  1:202877/97‑1
                       CCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCT                                                                                                     <  1:1158350/97‑1
                        CTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTA                                                                                                    <  2:1171360/97‑1
                        CTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTA                                                                                                    <  1:1135248/97‑1
                         TTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAA                                                                                                   <  1:731748/97‑1
                          TTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAAT                                                                                                  >  2:386547/1‑97
                                     TTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGC                                                                                       >  1:77957/1‑97
                                             TTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCA                                                                               >  2:1364411/1‑97
                                                       TTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACG                                                                     <  2:1059439/97‑1
                                                         CTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAA                                                                   <  2:849320/97‑1
                                                          TGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAAC                                                                  >  1:230390/1‑97
                                                                 CTTGAAATCACGGTAGTTGAGGCGTGATCTGTATCATTATGACACAGTAACACCTAATAGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAA                                                           <  2:501304/97‑1
                                                                    GAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAAC                                                        <  1:478131/97‑1
                                                                       AACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCT                                                     <  2:1118574/97‑1
                                                                         CACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGT                                                   >  1:690600/1‑97
                                                                               AATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATC                                             >  1:715969/1‑97
                                                                                 TTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAA                                           >  2:22109/1‑97
                                                                                 TTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAA                                           >  1:428819/1‑97
                                                                                  TAAGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAA                                          <  2:956318/97‑1
                                                                                    AGGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGT                                        <  1:758831/97‑1
                                                                                     GGCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTT                                       >  2:573162/1‑97
                                                                                      GCGTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTT                                      >  2:814513/1‑97
                                                                                        GTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTT                                    >  2:383616/1‑97
                                                                                        GTTATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTT                                    <  1:343360/97‑1
                                                                                           ATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATC                                 <  2:618462/97‑1
                                                                                           ATCTGTATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATC                                 >  2:810554/1‑97
                                                                                                TATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTT                            <  2:544810/97‑1
                                                                                                TATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTT                            <  2:154821/97‑1
                                                                                                 ATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTA                           >  1:738226/1‑97
                                                                                                 ATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTA                           >  2:463735/1‑97
                                                                                                 ATCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTA                           <  2:1123111/97‑1
                                                                                                  TCATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAA                          >  2:419699/1‑97
                                                                                                    ATTATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACT                        <  2:676949/97‑1
                                                                                                       ATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTA                     <  1:351811/97‑1
                                                                                                       ATGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTA                     <  2:107475/97‑1
                                                                                                       ATGAAACATTAACACCTAATGGTAAAACGGCCATTCCCACACGTACACGACCGTTTAAACACGCTGTAATATCAAAGTTTCTATCACTCTCACTTTA                     >  2:1285124/1‑97
                                                                                                        TGACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAA                    <  1:909793/97‑1
                                                                                                         GACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAA                   <  1:56438/97‑1
                                                                                                         GACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAA                   <  2:951483/97‑1
                                                                                                          ACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAAT                  >  1:237468/1‑97
                                                                                                          ACACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAAT                  <  2:441024/97‑1
                                                                                                           CACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATA                 <  2:202585/97‑1
                                                                                                           CACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATA                 <  2:1063292/97‑1
                                                                                                           CACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATA                 <  1:900835/97‑1
                                                                                                           CACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATA                 <  1:695379/97‑1
                                                                                                            ACATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATAT                >  2:683086/1‑97
                                                                                                            ACATTAACACCTAATGGGAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTGTAACTTTAAATAT                >  2:144727/1‑97
                                                                                                             CATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATT               <  1:208905/97‑1
                                                                                                              ATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTT              >  1:114106/1‑97
                                                                                                              ATTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTT              <  2:1088297/97‑1
                                                                                                               TTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTT             >  2:1087200/1‑97
                                                                                                               TTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTT             >  2:1087631/1‑97
                                                                                                               TTAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACCTTTAAAAACGCTGTAATATCCAAGTTTTTATCACTTTAACTTTAAATACTTT             >  2:1116593/1‑97
                                                                                                                TAACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTC            <  1:1060959/97‑1
                                                                                                                 AACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCC           >  2:382431/1‑97
                                                                                                                 AACACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCC           >  1:810357/1‑97
                                                                                                                   CACCTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCAC         >  2:922581/1‑97
                                                                                                                      CTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCACTCG      >  1:1164326/1‑97
                                                                                                                      CTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCACTCG      >  1:887086/1‑97
                                                                                                                      CTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCACTCG      <  1:419170/97‑1
                                                                                                                      CTAATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCACTCG      <  1:217756/97‑1
                                                                                                                       TAATGCTGAAACCGCCATTCTCAAACGTACACTCACGTTTAAAAACGCTCTAGTATCACAGTTTTTATCACTTTAACTTTAAATATTTTCCACACGT     <  2:1416342/97‑1
                                                                                                                        tATGGTAATACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCACTCGTG    <  1:24919/96‑1
                                                                                                                        AATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCACTCGTG    <  2:992380/97‑1
                                                                                                                        AATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCACTCGTG    >  2:1065630/1‑97
                                                                                                                        AATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCACTCGTG    <  2:149909/97‑1
                                                                                                                         ATGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCACTCGTGT   >  1:1382641/1‑97
                                                                                                                          TGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCACTCGTGTT  <  2:906727/97‑1
                                                                                                                                                                                                                           
CTTATATACTAAAATCCATCTGCCCTTTTTATGCCCTTTTTTACCTTGCAACACATTCTGAACACCTTGAAAACACTGTAATTAAGGCGTTATCTGTATCATTATGACACATTAACACCTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  BX571857/981119‑980997
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatcattatgacacattaacacctaatGGTAAAACGGCCATTCTCAAACGTACACGAACGTTTAAAAACGCTGTAATATCAAAGTTTTTATCACTTTAACTTTAAATATTTTCCACTCGTGTT  <  BX571857/1025750‑1025655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.